| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is menB [H]
Identifier: 33862678
GI number: 33862678
Start: 455321
End: 456214
Strand: Reverse
Name: menB [H]
Synonym: PMT0405
Alternate gene names: 33862678
Gene position: 456214-455321 (Counterclockwise)
Preceding gene: 33862679
Following gene: 33862677
Centisome position: 18.92
GC content: 54.81
Gene sequence:
>894_bases ATGGCTATGGATTCCAATCGGTTTGATAGGAGGCCAAGACAGGTTTTGCCTGGCAAGCCCACGATCGAATGGGAACCCTG GGGTGAATATCAAGACGTCCTGCTTGATCGCAGTTCAGAAGGAATTGCCAGGGTTGCGATTGATCGTCCGACCAAGCGCA ATGCTTTCCGACCACGCACGGTGATGGAACTCTGTGATGCGTTTACCAGAATTCGAGACGACCAACGTTTAGGCGTGGTT TTGTTCACCGGTGTTGGACCTGCTGACGATGGCGGCTATGCCTTTTGTGCAGGTGGTGACCAAAGTGTGCGCGGCGACGG TGGCTACCTCGATGAGGAGGGTTTGCCGCGCCTCAATGTTCTCGACCTACAGCGCATCATTCGCAGCTTGCCAAAGGTTG TGATTGCACTTGTCGCTGGCTATGCGATCGGCGGCGGCCAAGTGCTGCACTTGTTATGTGATCTCAGTCTGGCGGCAGAG AATGCCGTGTTTGGGCAAACCGGTCCCAAGGTGGGCAGCTTTGATGGTGGCTTTGGTGCTGGTTACCTAGCCAGAGTCGT GGGGCAACGCAAGGCTCGTGAAATCTGGTTTCTCTGTCGTCAATACGGAGCTGAAGAAGCGCTGAAAATGGGGTTGATCA ACGAGATTGTTCCTCTTGATGGTCTTGAAGCAGAGGGAGTGCGTTGGGCAAGAGAGGTGTTGCAGCACAGCCCCACAGCC ATCCGCTGCCTGAAGGCCGCATTCAATGCTGAAACCGATGGCTTGGCAGGACTTCAGGAGCTAGCCGGCCAGGCCACCCA TCTGTTCTATCGAACGGATGAAGCCCAGGAGGGGCGAAATGCTTTTCTACAAAAACGACGTCCAGATTTTTCAGGCTCAG GCTGGCTTCCCTAA
Upstream 100 bases:
>100_bases ATCGGCGTCAAGATTCATCGATGAGGCAACAGCTTCGCGAGGGATTGATGATGCATCTGCAGTCGATTTCCCAAAATGGC CACATTGATCTTTGATCCCG
Downstream 100 bases:
>100_bases CCAGCCGCTCTAGGCAGCGTCATGATTGACGCATCGTTTGCTTTGGGGAAGGAGTTCTTGCTACCGCTTCCACTGCCGCT GCTGCCCTCCCTGATTCATG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAMDSNRFDRRPRQVLPGKPTIEWEPWGEYQDVLLDRSSEGIARVAIDRPTKRNAFRPRTVMELCDAFTRIRDDQRLGVV LFTGVGPADDGGYAFCAGGDQSVRGDGGYLDEEGLPRLNVLDLQRIIRSLPKVVIALVAGYAIGGGQVLHLLCDLSLAAE NAVFGQTGPKVGSFDGGFGAGYLARVVGQRKAREIWFLCRQYGAEEALKMGLINEIVPLDGLEAEGVRWAREVLQHSPTA IRCLKAAFNAETDGLAGLQELAGQATHLFYRTDEAQEGRNAFLQKRRPDFSGSGWLP
Sequences:
>Translated_297_residues MAMDSNRFDRRPRQVLPGKPTIEWEPWGEYQDVLLDRSSEGIARVAIDRPTKRNAFRPRTVMELCDAFTRIRDDQRLGVV LFTGVGPADDGGYAFCAGGDQSVRGDGGYLDEEGLPRLNVLDLQRIIRSLPKVVIALVAGYAIGGGQVLHLLCDLSLAAE NAVFGQTGPKVGSFDGGFGAGYLARVVGQRKAREIWFLCRQYGAEEALKMGLINEIVPLDGLEAEGVRWAREVLQHSPTA IRCLKAAFNAETDGLAGLQELAGQATHLFYRTDEAQEGRNAFLQKRRPDFSGSGWLP >Mature_296_residues AMDSNRFDRRPRQVLPGKPTIEWEPWGEYQDVLLDRSSEGIARVAIDRPTKRNAFRPRTVMELCDAFTRIRDDQRLGVVL FTGVGPADDGGYAFCAGGDQSVRGDGGYLDEEGLPRLNVLDLQRIIRSLPKVVIALVAGYAIGGGQVLHLLCDLSLAAEN AVFGQTGPKVGSFDGGFGAGYLARVVGQRKAREIWFLCRQYGAEEALKMGLINEIVPLDGLEAEGVRWAREVLQHSPTAI RCLKAAFNAETDGLAGLQELAGQATHLFYRTDEAQEGRNAFLQKRRPDFSGSGWLP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=275, Percent_Identity=28, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI31542718, Length=256, Percent_Identity=29.6875, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4502327, Length=265, Percent_Identity=29.811320754717, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI70995211, Length=231, Percent_Identity=25.974025974026, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1788597, Length=272, Percent_Identity=62.8676470588235, Blast_Score=356, Evalue=1e-99, Organism=Escherichia coli, GI1787659, Length=253, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI221142681, Length=258, Percent_Identity=31.0077519379845, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082183, Length=210, Percent_Identity=29.0476190476191, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787660, Length=266, Percent_Identity=29.3233082706767, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788682, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25145438, Length=258, Percent_Identity=30.2325581395349, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17554946, Length=273, Percent_Identity=28.9377289377289, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17540714, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17549921, Length=214, Percent_Identity=27.1028037383178, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560910, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536985, Length=254, Percent_Identity=25.1968503937008, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129971, Length=284, Percent_Identity=29.2253521126761, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24653477, Length=284, Percent_Identity=29.2253521126761, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24653139, Length=277, Percent_Identity=29.2418772563177, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21357171, Length=277, Percent_Identity=27.0758122743682, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24654903, Length=206, Percent_Identity=27.6699029126214, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 32592; Mature: 32461
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDSNRFDRRPRQVLPGKPTIEWEPWGEYQDVLLDRSSEGIARVAIDRPTKRNAFRPRT CCCCCCCHHCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHH VMELCDAFTRIRDDQRLGVVLFTGVGPADDGGYAFCAGGDQSVRGDGGYLDEEGLPRLNV HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCH LDLQRIIRSLPKVVIALVAGYAIGGGQVLHLLCDLSLAAENAVFGQTGPKVGSFDGGFGA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH GYLARVVGQRKAREIWFLCRQYGAEEALKMGLINEIVPLDGLEAEGVRWAREVLQHSPTA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH IRCLKAAFNAETDGLAGLQELAGQATHLFYRTDEAQEGRNAFLQKRRPDFSGSGWLP HHHHHHHHCCCCCHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AMDSNRFDRRPRQVLPGKPTIEWEPWGEYQDVLLDRSSEGIARVAIDRPTKRNAFRPRT CCCCCCHHCCCHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCHH VMELCDAFTRIRDDQRLGVVLFTGVGPADDGGYAFCAGGDQSVRGDGGYLDEEGLPRLNV HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCH LDLQRIIRSLPKVVIALVAGYAIGGGQVLHLLCDLSLAAENAVFGQTGPKVGSFDGGFGA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH GYLARVVGQRKAREIWFLCRQYGAEEALKMGLINEIVPLDGLEAEGVRWAREVLQHSPTA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH IRCLKAAFNAETDGLAGLQELAGQATHLFYRTDEAQEGRNAFLQKRRPDFSGSGWLP HHHHHHHHCCCCCHHHHHHHHCCHHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]