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The map label for this gene is yqjB [H]

Identifier: 33862677

GI number: 33862677

Start: 454721

End: 455299

Strand: Reverse

Name: yqjB [H]

Synonym: PMT0404

Alternate gene names: 33862677

Gene position: 455299-454721 (Counterclockwise)

Preceding gene: 33862678

Following gene: 33862676

Centisome position: 18.89

GC content: 55.27

Gene sequence:

>579_bases
ATGATTGACGCATCGTTTGCTTTGGGGAAGGAGTTCTTGCTACCGCTTCCACTGCCGCTGCTGCCCTCCCTGATTCATGC
AGCTGTTCAGGACTCTCTTCCCCAAATCGTCGCCAGCTTCCCCCTCGCTGTGATTGAACGTGAGGGGCGGCATCTGGTCT
TGGATCGGCGTAGCCGTCGGCTGCTTGTTTTGGAAGATGGCTCCTTAATTAAAAGCTTCTCAGTGGCGGTTGGCATGCCT
GGCTGGGAGACTCCGACAGGTGAGTTTCAAGTTTTAAGCAAAACTCCCCATCCCATTTGGGAGCATCCCCAGAGCGGAAA
GCGAATCGGATCTGGGCCGAAGAATCCCCTTGGTAGTCGCTGGATCGGCTTCTATCGAGATTGCAATGGTAGAGACGCTC
ACGATGGTGATCGTTGGCTAACGATTGATGGCTGCGTCACGTCTGGCTTCCATGGAACGCCCCACCGCTGGACTGTTGGC
CGAGCCGTTTCCCATGGTTGTGTTCGGCTGTTTGAAGAGGACATCCAATCCCTCTATCGGCTGGTCAAAATCGGCACGCC
GCTCAAGGTTCTCCCATGA

Upstream 100 bases:

>100_bases
GGATGAAGCCCAGGAGGGGCGAAATGCTTTTCTACAAAAACGACGTCCAGATTTTTCAGGCTCAGGCTGGCTTCCCTAAC
CAGCCGCTCTAGGCAGCGTC

Downstream 100 bases:

>100_bases
TCGTGATCTGATTGAGCTGATGCACATTTAGAGTCTCGCGGCTCTCGACTGACTTGAAAATGCGCGTGCTATTTGCTGCT
GCGGAATGCGCGCCGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIDASFALGKEFLLPLPLPLLPSLIHAAVQDSLPQIVASFPLAVIEREGRHLVLDRRSRRLLVLEDGSLIKSFSVAVGMP
GWETPTGEFQVLSKTPHPIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVG
RAVSHGCVRLFEEDIQSLYRLVKIGTPLKVLP

Sequences:

>Translated_192_residues
MIDASFALGKEFLLPLPLPLLPSLIHAAVQDSLPQIVASFPLAVIEREGRHLVLDRRSRRLLVLEDGSLIKSFSVAVGMP
GWETPTGEFQVLSKTPHPIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVG
RAVSHGCVRLFEEDIQSLYRLVKIGTPLKVLP
>Mature_192_residues
MIDASFALGKEFLLPLPLPLLPSLIHAAVQDSLPQIVASFPLAVIEREGRHLVLDRRSRRLLVLEDGSLIKSFSVAVGMP
GWETPTGEFQVLSKTPHPIWEHPQSGKRIGSGPKNPLGSRWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVG
RAVSHGCVRLFEEDIQSLYRLVKIGTPLKVLP

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21285; Mature: 21285

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDASFALGKEFLLPLPLPLLPSLIHAAVQDSLPQIVASFPLAVIEREGRHLVLDRRSRR
CCCCCHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCE
LLVLEDGSLIKSFSVAVGMPGWETPTGEFQVLSKTPHPIWEHPQSGKRIGSGPKNPLGSR
EEEEECCCHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
WIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVGRAVSHGCVRLFEEDIQSLYR
HHHHEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LVKIGTPLKVLP
HHHCCCCCCCCC
>Mature Secondary Structure
MIDASFALGKEFLLPLPLPLLPSLIHAAVQDSLPQIVASFPLAVIEREGRHLVLDRRSRR
CCCCCHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCCE
LLVLEDGSLIKSFSVAVGMPGWETPTGEFQVLSKTPHPIWEHPQSGKRIGSGPKNPLGSR
EEEEECCCHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
WIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVGRAVSHGCVRLFEEDIQSLYR
HHHHEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
LVKIGTPLKVLP
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]