| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862675
Identifier: 33862675
GI number: 33862675
Start: 452322
End: 453041
Strand: Reverse
Name: 33862675
Synonym: PMT0402
Alternate gene names: NA
Gene position: 453041-452322 (Counterclockwise)
Preceding gene: 33862676
Following gene: 33862674
Centisome position: 18.79
GC content: 52.36
Gene sequence:
>720_bases ATGGGAAAGTCGCCCCCCCGGCCAGAGAAGCAAACGGGACAACTCCCAGTCCCCTATACCAATCCCTGGGTATCCCTGAG AGAGGGATTTCGTGATGTCTTCGCAGACCTTGGTCTGCGACTCAGGCAACTCTGGCGTCTCAACCGGCAAGGCGAATTCT CCACACCAAGGTTCTGGCCTTCTGCAATGGCACCAATGTTCTGGCCATTGACACTTGCAACAGTACTGGTCTTGGGAGTG TTCCTCAGCAGTCTGCTGATTGACCAACCTGCAGCTGTGGCACAACTAGATCCTGCAGAGACGTATCCCAGCAATTCAGC TGCATTGGCAGTGATGTCTAGCCCCTCCACTGCGGAGTCAGAACCTGTTGCAACGTTGTCGGAGCCTTCTGAACTGGAAT CCACACAACTTTCAGCGCCTTTAGCTGTACCTCTTCAGCTTGAGCCTCTCTTAACGATGCTGGCAGACAATGATCTCCCC AGTGGCTTGCTTCTTGCAGCCGAACCAAGACCCCTGGACAATGATCTTGTGTTGAGACTTAGTCCAGTTTGGAACAACCT CAATTCATCTCGACAGCGTGAACTTGCCGATCGTTGGCAGGCTCTTGCTGAACAGCTCGGTTATGACGAACTTCAACTTC AAAGCGAGGATGATCAACTGCTTGCCAGGACAGCAAGAGTGGGTGTGGGCATGATCATTTTCGATCAGGATTTGGCTTAA
Upstream 100 bases:
>100_bases TTGTTGGTTTTGCAGATTTAGCGGCTCTTTTGCAGACGACTCCATTGCTGCGCCCCAATCTTTTCAATCTGCCGCTTGGT CGTCAGGGCTCCTGATCAGC
Downstream 100 bases:
>100_bases TGAGACTGCGTCTGGGGCAGCTGGTCGAGTTTTGGGGTGCTCCGATGCATGTTCACGCGTCTGACCTAGATCTTGACCAA GCTGTTGGTCCGATCTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGKSPPRPEKQTGQLPVPYTNPWVSLREGFRDVFADLGLRLRQLWRLNRQGEFSTPRFWPSAMAPMFWPLTLATVLVLGV FLSSLLIDQPAAVAQLDPAETYPSNSAALAVMSSPSTAESEPVATLSEPSELESTQLSAPLAVPLQLEPLLTMLADNDLP SGLLLAAEPRPLDNDLVLRLSPVWNNLNSSRQRELADRWQALAEQLGYDELQLQSEDDQLLARTARVGVGMIIFDQDLA
Sequences:
>Translated_239_residues MGKSPPRPEKQTGQLPVPYTNPWVSLREGFRDVFADLGLRLRQLWRLNRQGEFSTPRFWPSAMAPMFWPLTLATVLVLGV FLSSLLIDQPAAVAQLDPAETYPSNSAALAVMSSPSTAESEPVATLSEPSELESTQLSAPLAVPLQLEPLLTMLADNDLP SGLLLAAEPRPLDNDLVLRLSPVWNNLNSSRQRELADRWQALAEQLGYDELQLQSEDDQLLARTARVGVGMIIFDQDLA >Mature_238_residues GKSPPRPEKQTGQLPVPYTNPWVSLREGFRDVFADLGLRLRQLWRLNRQGEFSTPRFWPSAMAPMFWPLTLATVLVLGVF LSSLLIDQPAAVAQLDPAETYPSNSAALAVMSSPSTAESEPVATLSEPSELESTQLSAPLAVPLQLEPLLTMLADNDLPS GLLLAAEPRPLDNDLVLRLSPVWNNLNSSRQRELADRWQALAEQLGYDELQLQSEDDQLLARTARVGVGMIIFDQDLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26355; Mature: 26224
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSPPRPEKQTGQLPVPYTNPWVSLREGFRDVFADLGLRLRQLWRLNRQGEFSTPRFWP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH SAMAPMFWPLTLATVLVLGVFLSSLLIDQPAAVAQLDPAETYPSNSAALAVMSSPSTAES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCEEEEEECCCCCCCC EPVATLSEPSELESTQLSAPLAVPLQLEPLLTMLADNDLPSGLLLAAEPRPLDNDLVLRL CCCCCCCCCHHHHHHHCCCCEECCEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEE SPVWNNLNSSRQRELADRWQALAEQLGYDELQLQSEDDQLLARTARVGVGMIIFDQDLA EHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCEEEEECCCCC >Mature Secondary Structure GKSPPRPEKQTGQLPVPYTNPWVSLREGFRDVFADLGLRLRQLWRLNRQGEFSTPRFWP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH SAMAPMFWPLTLATVLVLGVFLSSLLIDQPAAVAQLDPAETYPSNSAALAVMSSPSTAES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCCCEEEEEECCCCCCCC EPVATLSEPSELESTQLSAPLAVPLQLEPLLTMLADNDLPSGLLLAAEPRPLDNDLVLRL CCCCCCCCCHHHHHHHCCCCEECCEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEE SPVWNNLNSSRQRELADRWQALAEQLGYDELQLQSEDDQLLARTARVGVGMIIFDQDLA EHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA