| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33862655
Identifier: 33862655
GI number: 33862655
Start: 431384
End: 432148
Strand: Direct
Name: 33862655
Synonym: PMT0382
Alternate gene names: NA
Gene position: 431384-432148 (Clockwise)
Preceding gene: 33862654
Following gene: 33862660
Centisome position: 17.89
GC content: 62.09
Gene sequence:
>765_bases ATGTGGCTCGGAAACTACTCGAAGCCCACAGCCCTAACGGTTGGGACCCCGACCAGATCCTCCGCTTTGGAGGTGATCAG ATCAGTGCTGGGACGTTCTGGTGGCAAGCCCAGCAACACGGCTACCGGAGGCCCGCCGATGACTGATCTGCAGTCGGTGG TAGACCATCACTCCACCATCCCGGACGAGGCGATCAGGGATGCCGCCAAGAGCATCCGGGTCGCTCAGGGCCGCCAGCGA TTCAGCTTCGACAACCTCCTGCCGTCCGATCTAGCGAGGGCCGTGGAGATGGTGACGGAGGTGCTGCCTGCCGATGCGCT GACCTCCGTGTTTACGCTGCTCTGCGGTTACAGCGGCCTGCTCAAGCTCGGCACCAAGGTGTCGCCGGATGGTCGCTATT GGGTCCCCGCCAACCTGTACGTCGGGCTAGTGGGGCCAAGCGGTTTGACCAAGAGTCCAATCCAGAAGGCCCTCATCTCC GATCCATCCCGGCAGCTTCAGCAGGAAGAGAAGGCTCGGTATGACCTGCTGCTGAAGGTATGGGAGGACTCCGAACCACA AGACAGGGAGAAACATCCTGCCCGCCGGTGCCCACTGCATCAGAAGGAGTTCTCCCCGGAGGCGCTCGGGATGTGGCTGC AGTTCTACGAGCAGGCTGGCCTTGGTGTTCTGCTGACCCGCGCTGAATTGAGCGGGATGCTGCGGTCGCTGGAGGCTGAC ACCAGGCGCGGCAGGGGTACCGCTGAGGCTCAATTTTTAGAGTAG
Upstream 100 bases:
>100_bases CTCATCCCGCCACGGGTGCCGGGACACGGCAATTACCCGGTGGATCGGAACATGGCCTGGGGCCTGAAGGCTGCCTGCCG CGACGCTGGGTACGGTACGG
Downstream 100 bases:
>100_bases TACGACGGTGATGACTGCACTTCTCTCCGCCGGGCAGTGGTGAACCAGCGACCTACAAATAGTGAGAAAAAGCGCTTCAT TGGTTTGGAAGCGGTGGAGG
Product: Signal peptidase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MWLGNYSKPTALTVGTPTRSSALEVIRSVLGRSGGKPSNTATGGPPMTDLQSVVDHHSTIPDEAIRDAAKSIRVAQGRQR FSFDNLLPSDLARAVEMVTEVLPADALTSVFTLLCGYSGLLKLGTKVSPDGRYWVPANLYVGLVGPSGLTKSPIQKALIS DPSRQLQQEEKARYDLLLKVWEDSEPQDREKHPARRCPLHQKEFSPEALGMWLQFYEQAGLGVLLTRAELSGMLRSLEAD TRRGRGTAEAQFLE
Sequences:
>Translated_254_residues MWLGNYSKPTALTVGTPTRSSALEVIRSVLGRSGGKPSNTATGGPPMTDLQSVVDHHSTIPDEAIRDAAKSIRVAQGRQR FSFDNLLPSDLARAVEMVTEVLPADALTSVFTLLCGYSGLLKLGTKVSPDGRYWVPANLYVGLVGPSGLTKSPIQKALIS DPSRQLQQEEKARYDLLLKVWEDSEPQDREKHPARRCPLHQKEFSPEALGMWLQFYEQAGLGVLLTRAELSGMLRSLEAD TRRGRGTAEAQFLE >Mature_254_residues MWLGNYSKPTALTVGTPTRSSALEVIRSVLGRSGGKPSNTATGGPPMTDLQSVVDHHSTIPDEAIRDAAKSIRVAQGRQR FSFDNLLPSDLARAVEMVTEVLPADALTSVFTLLCGYSGLLKLGTKVSPDGRYWVPANLYVGLVGPSGLTKSPIQKALIS DPSRQLQQEEKARYDLLLKVWEDSEPQDREKHPARRCPLHQKEFSPEALGMWLQFYEQAGLGVLLTRAELSGMLRSLEAD TRRGRGTAEAQFLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27844; Mature: 27844
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLGNYSKPTALTVGTPTRSSALEVIRSVLGRSGGKPSNTATGGPPMTDLQSVVDHHSTI CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PDEAIRDAAKSIRVAQGRQRFSFDNLLPSDLARAVEMVTEVLPADALTSVFTLLCGYSGL CHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHH LKLGTKVSPDGRYWVPANLYVGLVGPSGLTKSPIQKALISDPSRQLQQEEKARYDLLLKV HHHCCEECCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WEDSEPQDREKHPARRCPLHQKEFSPEALGMWLQFYEQAGLGVLLTRAELSGMLRSLEAD HCCCCCCCHHCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH TRRGRGTAEAQFLE HHCCCCCCCCCCCC >Mature Secondary Structure MWLGNYSKPTALTVGTPTRSSALEVIRSVLGRSGGKPSNTATGGPPMTDLQSVVDHHSTI CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PDEAIRDAAKSIRVAQGRQRFSFDNLLPSDLARAVEMVTEVLPADALTSVFTLLCGYSGL CHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHH LKLGTKVSPDGRYWVPANLYVGLVGPSGLTKSPIQKALISDPSRQLQQEEKARYDLLLKV HHHCCEECCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WEDSEPQDREKHPARRCPLHQKEFSPEALGMWLQFYEQAGLGVLLTRAELSGMLRSLEAD HCCCCCCCHHCCCHHHCCCCHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH TRRGRGTAEAQFLE HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA