Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33862654

Identifier: 33862654

GI number: 33862654

Start: 430664

End: 431248

Strand: Direct

Name: 33862654

Synonym: PMT0381

Alternate gene names: NA

Gene position: 430664-431248 (Clockwise)

Preceding gene: 33862653

Following gene: 33862655

Centisome position: 17.86

GC content: 57.61

Gene sequence:

>585_bases
ATGCAGGGGGTCAGGAGTTCGAGTCTCCTTGGCTCCATTCTTAAAAATACTGTCCTAGACAGGGTTTTGGGCGGCAGAAA
GGCCGCTTTTTTAGTGCCCTTCTGCGCATCGTGTCCTGCCTGGGTAGTCACATGTCTGCCCATTTCTGCGCATGATTCTG
CGCATAGGAATTGTTCTGCGCACATGCCTCAGCAGAAGTGGTTCGCCCGCCTTCGTGGGCAGATAAAAGACAGGTGTGGA
ATGGGTTGGGGCATCGCTGATCGCAACGGTGACACCCAGCTCACCCGACGCATCAATGATGGAAAGCAGCACCAGAACCC
CAGACAATCGGTGCAGTTGGGGGTGCCATGGAACCCGGCCTGCAGCGGGGAAATTTTTCTGAAGGTCTGCCAGCACAAGC
AGCTGGTGGACGAGCGCCACTGCTCGCTGGCTGAGGCCAAAAAGAAACTAGATGCCAAGGACAGCGCCACCCCCACTATC
ACACGCTCGTTGGAGGAGGAGGACAGCGGCTGGGAGGCCGTCATCGATCCCCGTTGCCGGAACGCCCGCGTCACATCCCG
AAGTCGCTTTATCGCAAGCAGCTGA

Upstream 100 bases:

>100_bases
TGAGGCCTTGCCGTTGTAAGCTGTGTTTTGACGGCGGTACGAGCCCAGTGTTACCGGCGTTTATGGGGCCATAGCTCAGC
TGGTAGAGCACCTGCATGGC

Downstream 100 bases:

>100_bases
CGCGGACGCTGCAGGACATCGCCGATGCGTTGAAGCTCATCCCGCCACGGGTGCCGGGACACGGCAATTACCCGGTGGAT
CGGAACATGGCCTGGGGCCT

Product: M protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQGVRSSSLLGSILKNTVLDRVLGGRKAAFLVPFCASCPAWVVTCLPISAHDSAHRNCSAHMPQQKWFARLRGQIKDRCG
MGWGIADRNGDTQLTRRINDGKQHQNPRQSVQLGVPWNPACSGEIFLKVCQHKQLVDERHCSLAEAKKKLDAKDSATPTI
TRSLEEEDSGWEAVIDPRCRNARVTSRSRFIASS

Sequences:

>Translated_194_residues
MQGVRSSSLLGSILKNTVLDRVLGGRKAAFLVPFCASCPAWVVTCLPISAHDSAHRNCSAHMPQQKWFARLRGQIKDRCG
MGWGIADRNGDTQLTRRINDGKQHQNPRQSVQLGVPWNPACSGEIFLKVCQHKQLVDERHCSLAEAKKKLDAKDSATPTI
TRSLEEEDSGWEAVIDPRCRNARVTSRSRFIASS
>Mature_194_residues
MQGVRSSSLLGSILKNTVLDRVLGGRKAAFLVPFCASCPAWVVTCLPISAHDSAHRNCSAHMPQQKWFARLRGQIKDRCG
MGWGIADRNGDTQLTRRINDGKQHQNPRQSVQLGVPWNPACSGEIFLKVCQHKQLVDERHCSLAEAKKKLDAKDSATPTI
TRSLEEEDSGWEAVIDPRCRNARVTSRSRFIASS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21535; Mature: 21535

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVRSSSLLGSILKNTVLDRVLGGRKAAFLVPFCASCPAWVVTCLPISAHDSAHRNCSA
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
HMPQQKWFARLRGQIKDRCGMGWGIADRNGDTQLTRRINDGKQHQNPRQSVQLGVPWNPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHCEEECCCCCCC
CSGEIFLKVCQHKQLVDERHCSLAEAKKKLDAKDSATPTITRSLEEEDSGWEAVIDPRCR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC
NARVTSRSRFIASS
CCCCCHHHHHCCCC
>Mature Secondary Structure
MQGVRSSSLLGSILKNTVLDRVLGGRKAAFLVPFCASCPAWVVTCLPISAHDSAHRNCSA
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHCCHHHHHHHCCCCCCCCCCCCCCC
HMPQQKWFARLRGQIKDRCGMGWGIADRNGDTQLTRRINDGKQHQNPRQSVQLGVPWNPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHCEEECCCCCCC
CSGEIFLKVCQHKQLVDERHCSLAEAKKKLDAKDSATPTITRSLEEEDSGWEAVIDPRCR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC
NARVTSRSRFIASS
CCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA