| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862630
Identifier: 33862630
GI number: 33862630
Start: 406893
End: 407327
Strand: Direct
Name: 33862630
Synonym: PMT0357
Alternate gene names: NA
Gene position: 406893-407327 (Clockwise)
Preceding gene: 33862629
Following gene: 33862631
Centisome position: 16.88
GC content: 54.94
Gene sequence:
>435_bases ATGAATTGCAGAAGCTTGTCTAGGTTGATTTCCTTTGTTCTTAGCTTTCTAGTGATGTTGTCCGGTCATCCTGATGTCGC GATTGCCGCTCGTCATGATCCTGATGGCGGCGATGACGTTGCTGTCGTCGAGCATCTGCGCATCAAGGTGCCGGCCCATG CACGGGAGGCTTGGCTCAAAGCTGAGCAGGGCAGTTGGGAACCCTGGCTCGCGAAGCAGAGTGGCTATCTGGGGCGGGAT ATTTTTTGGGACGCTGAACAGGAGGAGGGCATCTTGCTGATTCGTTGGGCCAGCAGAGAACAGTGGAAATCGATTCCACA GGCTGAGGTGGATGTGGTGCAGGCACGCTTTGAACAGCTGGCCCGTGAGGCCACAGGTCAGGCCAGTAGTCATCCTTTCT TGCTGCAATTTGAAGGCGAATTGGTGCCTCAGTGA
Upstream 100 bases:
>100_bases TGGGTGTGAAGGCCACCACCAATGAAGGGCTTGGACCGGAAGGTCGAGAGGAGGGGATGAGTAGTCAGGCAGTCGCACTG TTGCAGCAGATAGGCCTGAC
Downstream 100 bases:
>100_bases CTGAGCCGCAGGTACGGCTGGATCTACAGCGGCGGCAGCGGCTTGGCATGGTGGAGGCGATCTTTGGTGAACACAAGACC AGTGAACAGATCGCAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ
Sequences:
>Translated_144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ >Mature_144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16272; Mature: 16272
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEHHEEEECCCHHHHHHHH AEQGSWEPWLAKQSGYLGRDIFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQL CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH AREATGQASSHPFLLQFEGELVPQ HHHHCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEHHEEEECCCHHHHHHHH AEQGSWEPWLAKQSGYLGRDIFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQL CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH AREATGQASSHPFLLQFEGELVPQ HHHHCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA