| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862574
Identifier: 33862574
GI number: 33862574
Start: 344612
End: 345256
Strand: Direct
Name: 33862574
Synonym: PMT0301
Alternate gene names: NA
Gene position: 344612-345256 (Clockwise)
Preceding gene: 33862573
Following gene: 33862576
Centisome position: 14.29
GC content: 38.29
Gene sequence:
>645_bases ATGACTCCAAGTGAGATTGCCGATCTTGTTTCCCTGGGCGAAATCAGGAGAAATCTAGACAAAATGAATATTTCGATTGA TCAGGGTGAGGAAGAAGTTATGTGCATTGTGGAAGATAAACTCAAAGAAAAAGCAATAAAATATAGTGAGGATGATCTTT ATGATGCCAATAAACTAGTCATCGAAAAGTTCAATAGTGCATATAGATCTCAATTAAAGAAAGAGGATCAATTCAAAAAT AGTACTGTTGAGGAAAACACGTCTGTTTCACCTATTCGTACGTATGGACCATCTGTAGGGATAGGAATTGGTGTTGCTGC GATCACTGCTATTGGTGTTTCTGCAATTGGAGCACAAAGAACAATGACTATTGCATCTTCTGCTGCTTTAGGTTCATCAG CAGTAGTACTGTCCTATAAATTCAGGTCTACAAGCAAATCTGCTGAAGCAGCAAAAACGGACAAAGTTATCCGTGAGTTC ATTTCAGAGTTTAGGGAAGAAGCAGATAATCTGCCTAATGCTTATAAAAATTTTCGAAAGGGTGCCCGTCAGTACTCCAG TGTTGCTTCAACAGAGGAACTTTTTGGCGCAATACACAAATTCAATGCCGCTTGGAAACATGCAAAGGATAAGTATAAAC TTTAA
Upstream 100 bases:
>100_bases TGACAGCATCTCAAGGGATATCAAGACCCGTTAATCCAGTGCTGATCACGCGCATCTAAGGATTATGAGAAAGTGACTAT TGCCCTGGAAGAGGTCGAAA
Downstream 100 bases:
>100_bases GATAATTGCTAAGGATTGGAGAATCCTATTGATAAATAATTTTGGTCAAGACCGAATTCACCAATGGTTCCTGAAAAGAT TTAAATTGCTCTCAAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTPSEIADLVSLGEIRRNLDKMNISIDQGEEEVMCIVEDKLKEKAIKYSEDDLYDANKLVIEKFNSAYRSQLKKEDQFKN STVEENTSVSPIRTYGPSVGIGIGVAAITAIGVSAIGAQRTMTIASSAALGSSAVVLSYKFRSTSKSAEAAKTDKVIREF ISEFREEADNLPNAYKNFRKGARQYSSVASTEELFGAIHKFNAAWKHAKDKYKL
Sequences:
>Translated_214_residues MTPSEIADLVSLGEIRRNLDKMNISIDQGEEEVMCIVEDKLKEKAIKYSEDDLYDANKLVIEKFNSAYRSQLKKEDQFKN STVEENTSVSPIRTYGPSVGIGIGVAAITAIGVSAIGAQRTMTIASSAALGSSAVVLSYKFRSTSKSAEAAKTDKVIREF ISEFREEADNLPNAYKNFRKGARQYSSVASTEELFGAIHKFNAAWKHAKDKYKL >Mature_213_residues TPSEIADLVSLGEIRRNLDKMNISIDQGEEEVMCIVEDKLKEKAIKYSEDDLYDANKLVIEKFNSAYRSQLKKEDQFKNS TVEENTSVSPIRTYGPSVGIGIGVAAITAIGVSAIGAQRTMTIASSAALGSSAVVLSYKFRSTSKSAEAAKTDKVIREFI SEFREEADNLPNAYKNFRKGARQYSSVASTEELFGAIHKFNAAWKHAKDKYKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23650; Mature: 23519
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSEIADLVSLGEIRRNLDKMNISIDQGEEEVMCIVEDKLKEKAIKYSEDDLYDANKLV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IEKFNSAYRSQLKKEDQFKNSTVEENTSVSPIRTYGPSVGIGIGVAAITAIGVSAIGAQR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHH TMTIASSAALGSSAVVLSYKFRSTSKSAEAAKTDKVIREFISEFREEADNLPNAYKNFRK HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GARQYSSVASTEELFGAIHKFNAAWKHAKDKYKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPSEIADLVSLGEIRRNLDKMNISIDQGEEEVMCIVEDKLKEKAIKYSEDDLYDANKLV CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH IEKFNSAYRSQLKKEDQFKNSTVEENTSVSPIRTYGPSVGIGIGVAAITAIGVSAIGAQR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHH TMTIASSAALGSSAVVLSYKFRSTSKSAEAAKTDKVIREFISEFREEADNLPNAYKNFRK HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GARQYSSVASTEELFGAIHKFNAAWKHAKDKYKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA