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The map label for this gene is ybiX [C]

Identifier: 33862559

GI number: 33862559

Start: 325058

End: 325723

Strand: Reverse

Name: ybiX [C]

Synonym: PMT0286

Alternate gene names: 33862559

Gene position: 325723-325058 (Counterclockwise)

Preceding gene: 33862564

Following gene: 33862558

Centisome position: 13.51

GC content: 54.65

Gene sequence:

>666_bases
ATGGAGCCCCTGACCCATCCATTGCTTGATGAGGCAACTGTGAGCCAATTGCGTGCAACTCTCTTGGCTGACGAAACCTC
ATGGCAGGACGGACGTAAAACAGCGGGCTATCAAGCAGCCGAAGTCAAGAACAACCTCCAGCTGGATCGCAACTCAAAAA
CCGCCAAAGAAAACAGCCAGCTGGTGATTAAGCAGCTCGAATCGGATCCGCTTGTGAAGAGCTTTGCCTTGCCAAGGCAC
ATCCACGGGGTGATGTTCAGTCGGTCCGGCATTGGCCAGGGCTATGGAATGCATGTCGACAATGCCTACATGAGCTCAGG
GCGTAGCGACCTCTCCTTCACGCTGTTTCTAAACGAGCCAGAAAGTTACGAGGGGGGGGCTCTGTGCATTCAAACCTTGC
AAGACAGCAAACAAGTGAAGCTGCCAGCTGGCCAGGTGATCATTTATCCCAGCACAAGCCTGCATGCCGTGGAAACAGTC
ACTGCTGGTGAACGGCTGGTTTGTGTTGGCTGGATCCAGAGCTACATCAGCAGCAATGAAGACCGCACTATTCTGTTTGG
CCTCAATGCTGGTGCCCGCGCCCTTCTTGCCGAGCATGGCCGTTCACCAGAACTGGACTTGATCTTTCAGGCCTACACCA
ACCTGCTCAGGCGCCTCGGCAGCTGA

Upstream 100 bases:

>100_bases
AAGCCTCCTTGCGCATTCCATACCAGCTGCTGTAACAAATGATGCGCTCACGACCCAAGAGGCTCAACGCTCTGATGATG
GAATTTCCTCAGCAATCTCT

Downstream 100 bases:

>100_bases
AGCCAGAGTCATTTGATACCAAGCCAAGTAACGAATCGCCAAACAATGGTGGCGTGGAGGAGCCAAAATGTATGTAGATT
CACTTATCTGCAAAGCATGA

Product: hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEPLTHPLLDEATVSQLRATLLADETSWQDGRKTAGYQAAEVKNNLQLDRNSKTAKENSQLVIKQLESDPLVKSFALPRH
IHGVMFSRSGIGQGYGMHVDNAYMSSGRSDLSFTLFLNEPESYEGGALCIQTLQDSKQVKLPAGQVIIYPSTSLHAVETV
TAGERLVCVGWIQSYISSNEDRTILFGLNAGARALLAEHGRSPELDLIFQAYTNLLRRLGS

Sequences:

>Translated_221_residues
MEPLTHPLLDEATVSQLRATLLADETSWQDGRKTAGYQAAEVKNNLQLDRNSKTAKENSQLVIKQLESDPLVKSFALPRH
IHGVMFSRSGIGQGYGMHVDNAYMSSGRSDLSFTLFLNEPESYEGGALCIQTLQDSKQVKLPAGQVIIYPSTSLHAVETV
TAGERLVCVGWIQSYISSNEDRTILFGLNAGARALLAEHGRSPELDLIFQAYTNLLRRLGS
>Mature_221_residues
MEPLTHPLLDEATVSQLRATLLADETSWQDGRKTAGYQAAEVKNNLQLDRNSKTAKENSQLVIKQLESDPLVKSFALPRH
IHGVMFSRSGIGQGYGMHVDNAYMSSGRSDLSFTLFLNEPESYEGGALCIQTLQDSKQVKLPAGQVIIYPSTSLHAVETV
TAGERLVCVGWIQSYISSNEDRTILFGLNAGARALLAEHGRSPELDLIFQAYTNLLRRLGS

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

Organism=Escherichia coli, GI87081784, Length=215, Percent_Identity=38.6046511627907, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005123
- InterPro:   IPR006620 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24293; Mature: 24293

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLTHPLLDEATVSQLRATLLADETSWQDGRKTAGYQAAEVKNNLQLDRNSKTAKENSQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHH
LVIKQLESDPLVKSFALPRHIHGVMFSRSGIGQGYGMHVDNAYMSSGRSDLSFTLFLNEP
HHHHHHCCCCCHHHHCCHHHHHHHHEECCCCCCCCCEEECHHHHHCCCCCEEEEEEECCC
ESYEGGALCIQTLQDSKQVKLPAGQVIIYPSTSLHAVETVTAGERLVCVGWIQSYISSNE
CCCCCCCEEEEECCCCCEEECCCCCEEEECCCCCEEEEEECCCCEEEEHHHHHHHHCCCC
DRTILFGLNAGARALLAEHGRSPELDLIFQAYTNLLRRLGS
CCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPLTHPLLDEATVSQLRATLLADETSWQDGRKTAGYQAAEVKNNLQLDRNSKTAKENSQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHH
LVIKQLESDPLVKSFALPRHIHGVMFSRSGIGQGYGMHVDNAYMSSGRSDLSFTLFLNEP
HHHHHHCCCCCHHHHCCHHHHHHHHEECCCCCCCCCEEECHHHHHCCCCCEEEEEEECCC
ESYEGGALCIQTLQDSKQVKLPAGQVIIYPSTSLHAVETVTAGERLVCVGWIQSYISSNE
CCCCCCCEEEEECCCCCEEECCCCCEEEECCCCCEEEEEECCCCEEEEHHHHHHHHCCCC
DRTILFGLNAGARALLAEHGRSPELDLIFQAYTNLLRRLGS
CCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA