| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862558
Identifier: 33862558
GI number: 33862558
Start: 324713
End: 325012
Strand: Reverse
Name: 33862558
Synonym: PMT0285
Alternate gene names: NA
Gene position: 325012-324713 (Counterclockwise)
Preceding gene: 33862559
Following gene: 33862555
Centisome position: 13.48
GC content: 47.0
Gene sequence:
>300_bases ATGGTGGCGTGGAGGAGCCAAAATGTATGTAGATTCACTTATCTGCAAAGCATGAGTAAAAAGTCTCCTGTAGCAATATT TCTTGCAGCTTCTGCACTGCTGGCGGCAAACGCACTTCAGCCAAATCTCAGTCACGCTGGCGAAGGCGGTGAAGGTGATA TGGGTGGACTGAAAGAGTGGACCACTGATCAAGACATCGATGCTGAAAGCAAACCTGATGAAGATGCGAAGAAAGCTGCC AAAAAAGCAAAGAAATCTAATATTTGCGTCCCGATCGGCGAAGGAGAAAACTGCTGGTGA
Upstream 100 bases:
>100_bases ACTGGACTTGATCTTTCAGGCCTACACCAACCTGCTCAGGCGCCTCGGCAGCTGAAGCCAGAGTCATTTGATACCAAGCC AAGTAACGAATCGCCAAACA
Downstream 100 bases:
>100_bases ACCTATTCTGAAATAGTTTTCAAAAACACCGCTCTAAACGAAGACAATCAAGCTCATTCACAAGGCTTCTTCTGATCAGG AAGGAGCCTTTTTTATTAAG
Product: M20/M25/M40 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MVAWRSQNVCRFTYLQSMSKKSPVAIFLAASALLAANALQPNLSHAGEGGEGDMGGLKEWTTDQDIDAESKPDEDAKKAA KKAKKSNICVPIGEGENCW
Sequences:
>Translated_99_residues MVAWRSQNVCRFTYLQSMSKKSPVAIFLAASALLAANALQPNLSHAGEGGEGDMGGLKEWTTDQDIDAESKPDEDAKKAA KKAKKSNICVPIGEGENCW >Mature_99_residues MVAWRSQNVCRFTYLQSMSKKSPVAIFLAASALLAANALQPNLSHAGEGGEGDMGGLKEWTTDQDIDAESKPDEDAKKAA KKAKKSNICVPIGEGENCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10627; Mature: 10627
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAWRSQNVCRFTYLQSMSKKSPVAIFLAASALLAANALQPNLSHAGEGGEGDMGGLKEW CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TTDQDIDAESKPDEDAKKAAKKAKKSNICVPIGEGENCW CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCC >Mature Secondary Structure MVAWRSQNVCRFTYLQSMSKKSPVAIFLAASALLAANALQPNLSHAGEGGEGDMGGLKEW CCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TTDQDIDAESKPDEDAKKAAKKAKKSNICVPIGEGENCW CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA