Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33862447

Identifier: 33862447

GI number: 33862447

Start: 196530

End: 197765

Strand: Reverse

Name: 33862447

Synonym: PMT0174

Alternate gene names: NA

Gene position: 197765-196530 (Counterclockwise)

Preceding gene: 33862448

Following gene: 33862446

Centisome position: 8.2

GC content: 55.1

Gene sequence:

>1236_bases
GTGAGTCCATTCCCCTGTTTGCGAGCCCATCAACGCAACATCTTTCTGACAGCCTCTGGCATCAGTACTGCAGGCTCGTT
CGCTGGAATGACTGCAAAAGGCTGGATCCTCATGGACGGCACCAACAGTCCAATGTTGCTTGCCGCCCACTTCGCCGCCC
TTTCCCTGCCAACTCTGCTGGTCAGTGGAGCAGCAGGTACCTGCACAGACCGATTCGGCTGTGAACGGGTTCTAGTGCAA
GCCCAGTGGGGCCTTTTAGCAGCTGCGTTACTGGGAGCACTGGCCATTCCTCTGATGACAGGAACCGCGCTCGTGACAAT
GCTATTAACCAGCACGTTGCTTGTCGGGATCGCGAGTGCTTACGAACTCACTGCCCGCAATAAATACTGCGCCCTATTGA
TAGACGAGCCCAATCAACTGGCCCCCTATCTCTCTAGTTTTGCGGTTGTGTTCAACGTAGGCAAACTCCTTGGGCCTCCC
ATAGGAGGATGGTTACTGGTCATCACAGGACCTGCGGCTGCTCTCAGCATTGATGCCGCAAGTTACTTACTACCGATCGC
CAGTCTCCTCTGGTTACTCGATCCAAACCGAAGCCAAGAACAACGCAGCGTTCCGGGTAAGCAATCAACAATGCTCTATG
CATGGCACAACAGCAGCTCTTCGCTTCGACATGTGCTGGGCTTCACCGCAACACTCTGCTTGGTAGGTTTTTTCCACCCT
GGTCTAGCCCCTCTAATCGCCGACCAGGTATTGGGTTCAGATCCAAGAGATCTTGGCGTGTTCACCAGCGTGCTTGCAGC
AGGGAGCATTGCTGGGGGGGTGGTCCTACAACGCAATAGCCAACAATTCTGTAGACGCCCATTTCTCACGCTGAGTGGGT
TCGCTCTCATCACTGCCATCGCCCAATTGGGAATGGCTCAAACTGAAAACACGCCACTAGCATTCAGCCTCACAATGACC
CTGCTGATTGGAGCTGGTACTGCAGGCCTATTGAGCAGCTGCAACATGATCACCCAAGTGGGGTCCCCTCAGGTCTTGCG
TGGGCGCATGGCAGGGCTAAGTCAAATCGCCTTCCTTGGGGGAGGAGGGCTAAGTGGCCTTCTTGCCGCTCAGATGGTGA
TTTCAACGGGCATATCCACGACCTTCGCCACCGCAGGTGGAATCGGACTTGGCCTAGCCCTCTGGGGGTTCTGGCAAAAA
GGCAGAACCGTACTAGAGGAGGTCAGATCAGCTTGA

Upstream 100 bases:

>100_bases
GAACGATGGTTCCTGTCTTCATTACCGGCTCTGATGTCTATGACCTCACCGGCCAGCTGGTAGACACCAACGCCATGGCG
GTCACAGCCCAGACGTCTCA

Downstream 100 bases:

>100_bases
TGCCTTTAAGAACCTTGGTTAGTGCGAATGCCGCCACCAGGCCAACTGCGACGAACACCAAATAAAAAACGACGCCCATG
TGCAACAAATCAGGTGAACA

Product: major facilitator superfamily multidrug-efflux transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Transporter; Facilitator Superfamily Multidrug-Efflux Transporter; Facilitator Superfamily Permease; Arabinose Efflux Permease; Macrolide-Efflux Protein; Permeases Of Facilitator Superfamily

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNSPMLLAAHFAALSLPTLLVSGAAGTCTDRFGCERVLVQ
AQWGLLAAALLGALAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPP
IGGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSSSSLRHVLGFTATLCLVGFFHP
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQQFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMT
LLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTGISTTFATAGGIGLGLALWGFWQK
GRTVLEEVRSA

Sequences:

>Translated_411_residues
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNSPMLLAAHFAALSLPTLLVSGAAGTCTDRFGCERVLVQ
AQWGLLAAALLGALAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPP
IGGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSSSSLRHVLGFTATLCLVGFFHP
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQQFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMT
LLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTGISTTFATAGGIGLGLALWGFWQK
GRTVLEEVRSA
>Mature_410_residues
SPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNSPMLLAAHFAALSLPTLLVSGAAGTCTDRFGCERVLVQA
QWGLLAAALLGALAIPLMTGTALVTMLLTSTLLVGIASAYELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPI
GGWLLVITGPAAALSIDAASYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSSSSLRHVLGFTATLCLVGFFHPG
LAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQQFCRRPFLTLSGFALITAIAQLGMAQTENTPLAFSLTMTL
LIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLGGGGLSGLLAAQMVISTGISTTFATAGGIGLGLALWGFWQKG
RTVLEEVRSA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42668; Mature: 42536

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNSPMLLAAHFAALSLPTLL
CCCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
VSGAAGTCTDRFGCERVLVQAQWGLLAAALLGALAIPLMTGTALVTMLLTSTLLVGIASA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPIGGWLLVITGPAAALSIDAA
HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHH
SYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSSSSLRHVLGFTATLCLVGFFHP
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQQFCRRPFLTLSGFALITAI
CHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHH
AQLGMAQTENTPLAFSLTMTLLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLG
HHHCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEC
GGGLSGLLAAQMVISTGISTTFATAGGIGLGLALWGFWQKGRTVLEEVRSA
CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPFPCLRAHQRNIFLTASGISTAGSFAGMTAKGWILMDGTNSPMLLAAHFAALSLPTLL
CCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
VSGAAGTCTDRFGCERVLVQAQWGLLAAALLGALAIPLMTGTALVTMLLTSTLLVGIASA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YELTARNKYCALLIDEPNQLAPYLSSFAVVFNVGKLLGPPIGGWLLVITGPAAALSIDAA
HHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHH
SYLLPIASLLWLLDPNRSQEQRSVPGKQSTMLYAWHNSSSSLRHVLGFTATLCLVGFFHP
HHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GLAPLIADQVLGSDPRDLGVFTSVLAAGSIAGGVVLQRNSQQFCRRPFLTLSGFALITAI
CHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHH
AQLGMAQTENTPLAFSLTMTLLIGAGTAGLLSSCNMITQVGSPQVLRGRMAGLSQIAFLG
HHHCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEC
GGGLSGLLAAQMVISTGISTTFATAGGIGLGLALWGFWQKGRTVLEEVRSA
CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA