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The map label for this gene is 33359540

Identifier: 33359540

GI number: 33359540

Start: 1045164

End: 1045766

Strand: Reverse

Name: 33359540

Synonym: PF1098

Alternate gene names: NA

Gene position: 1045766-1045164 (Counterclockwise)

Preceding gene: 18977476

Following gene: 18977469

Centisome position: 54.8

GC content: 40.8

Gene sequence:

>603_bases
ATGCTTTTATACATGCAGTTTAGTGAGAACTTCGAAAGGGCAAAAAAGGAGGCTTTAATAAGCCTTGAAATTGCCCTAAG
AAAAGGGGAGGTTGACGAAGACATAATCCCTCTTTTAAAGAAAATTAACTCTCTAGACAACTATTTCACTACCTCATCTT
GCTCTGGAAGAATCTCCGTAATGGAGATGCCTCATTTTGGAGACAAGGTGAACGCCAAGTGGCTTGGGAAGTGGCACAGA
GAGGTTTCCCTCGATGAAGTTTTGGGGGCTATTAAAAAGCATAGGAGTGGACAGCTGTGGTTTCTTGTGAGAAGTCCCAT
TCTTCACGTTGGGGCTAAGACTCTGGAAGATGCAATAAGGCTTGTAAACTTGGCCGTTTCCTGCGGATTTAAGTATTCTA
ACATAAAGAGCATAAGCAACAAAAAGCTAATCGTTGAAATTAGATCTACGGAGAGAATGGACGTTCTCCTAGGAGAAAAT
GGAAGAATACTCGTTGGAGAAGAATATTTGAGGAAGATAGTTGAGATAGCTAATGCCCAGGTGAGAAGGTTTAAGGAGAA
GTTAAAGAGACTTGAGTCAAATATTGATGCGCTAAATCGATAA

Upstream 100 bases:

>100_bases
CATATCTGGGCCGAAAGAGTACACATGCTTTTCCTTTGGGATAAATATCATGGCTTTCACCATAAATGCTAGGTAGGTTA
TCTTTAAAAGCTCCGCCTGA

Downstream 100 bases:

>100_bases
GTATATAACTTACGCCCCCATAAGTTACTTATGGTGGCATAAGTGCTTTTTGACTTAAGACCTAAAGAGAGAAGGGAGGA
CATCTTTGACAGAGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLLYMQFSENFERAKKEALISLEIALRKGEVDEDIIPLLKKINSLDNYFTTSSCSGRISVMEMPHFGDKVNAKWLGKWHR
EVSLDEVLGAIKKHRSGQLWFLVRSPILHVGAKTLEDAIRLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGEN
GRILVGEEYLRKIVEIANAQVRRFKEKLKRLESNIDALNR

Sequences:

>Translated_200_residues
MLLYMQFSENFERAKKEALISLEIALRKGEVDEDIIPLLKKINSLDNYFTTSSCSGRISVMEMPHFGDKVNAKWLGKWHR
EVSLDEVLGAIKKHRSGQLWFLVRSPILHVGAKTLEDAIRLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGEN
GRILVGEEYLRKIVEIANAQVRRFKEKLKRLESNIDALNR
>Mature_200_residues
MLLYMQFSENFERAKKEALISLEIALRKGEVDEDIIPLLKKINSLDNYFTTSSCSGRISVMEMPHFGDKVNAKWLGKWHR
EVSLDEVLGAIKKHRSGQLWFLVRSPILHVGAKTLEDAIRLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGEN
GRILVGEEYLRKIVEIANAQVRRFKEKLKRLESNIDALNR

Specific function: Unknown

COG id: COG1590

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0130 family [H]

Homologues:

Organism=Homo sapiens, GI42734381, Length=190, Percent_Identity=33.1578947368421, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI242332558, Length=187, Percent_Identity=26.7379679144385, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003827
- InterPro:   IPR022908 [H]

Pfam domain/function: PF02676 TYW3 [H]

EC number: NA

Molecular weight: Translated: 22972; Mature: 22972

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYMQFSENFERAKKEALISLEIALRKGEVDEDIIPLLKKINSLDNYFTTSSCSGRISV
CEEEEEHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCEECCCCCCEEEE
MEMPHFGDKVNAKWLGKWHREVSLDEVLGAIKKHRSGQLWFLVRSPILHVGAKTLEDAIR
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
LVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGENGRILVGEEYLRKIVEIANAQ
HHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEECHHHHHHHHHHHHHH
VRRFKEKLKRLESNIDALNR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLYMQFSENFERAKKEALISLEIALRKGEVDEDIIPLLKKINSLDNYFTTSSCSGRISV
CEEEEEHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCEECCCCCCEEEE
MEMPHFGDKVNAKWLGKWHREVSLDEVLGAIKKHRSGQLWFLVRSPILHVGAKTLEDAIR
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH
LVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGENGRILVGEEYLRKIVEIANAQ
HHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEECHHHHHHHHHHHHHH
VRRFKEKLKRLESNIDALNR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]