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The map label for this gene is sgcQ [C]

Identifier: 33359517

GI number: 33359517

Start: 834828

End: 835631

Strand: Direct

Name: sgcQ [C]

Synonym: PF0860

Alternate gene names: 33359517

Gene position: 834828-835631 (Clockwise)

Preceding gene: 18977228

Following gene: 18977233

Centisome position: 43.75

GC content: 43.41

Gene sequence:

>804_bases
GTGTTGGGAGTGACCATGAAGGACTTGGATTTTAGTAAGAAACCATTGATAGGGGTTGTCCATTTAAAGCCTCTCCCAGG
TTCTCCTAGATATGGGGGAGATTTTGAGGAGGTAATAGAATGGGCTATCAGGGATGCCAAAACTTATGAAGAGGCTGGGT
TCGACGGAATAATAGTGGAGAACTTTGGAGATTCTCCCTTCTCAAAGACTCTTCCCAGGGAGGTTATTCCAGCATTTACA
GTAGTAGCGAAAGCCGTAAAGAAAGAGGTCTCTCTTCCCCTGGGAATAAATGCATTAAGAAATGACTGTATAGTTGCCTA
CTCAATTGCGCATGCGGTGGGAGGGAGCTTTATCAGAGTTAATGTTCTAACTGGAGTTGCTTTTACGGATCAAGGAATAA
TTGAGGGGTGTGCAAGGGAGCTATGGAACGTCAAAAGGATAATAGGAGGGGACATCTTAACCCTTGCAGATGTGCACGTA
AAGCATGCGGTCCACTTCACAAACTTTGAAGATGCAGTAAAAGATACTGTGGAGAGGGGATTGGCAGATGGAATTATAGT
TACGGGAAGAAGAACGGGGGAGAGCATTAGCTTGGAGGATTTAATCTTGGCAAAAAGGGTAAGCAGTATTCCAGTTTTGG
TAGGCTCTGGAGTTAATCCAAGGAATTTCAGAACACTTTTTAAGTATGCCGACGGTTTCATAGTTGGAACCTGGGTAAAA
GAAAATGGCAAAATTAACAATCCCGTCTCACTTGAAAGAGCAAAAATCCTCGTAAGGATGAAAAACAGCCTAATGGGGGT
ATAG

Upstream 100 bases:

>100_bases
CCTCTATTATCTCTTCCTGATTTTTCTTGAAGAACTCGATGTGAGCGTGAGCATCTATCATGAATCTCACCGAAAACCTT
AACCTAACTTGGAGTTATAA

Downstream 100 bases:

>100_bases
CAATGGGAAAATACTTTGGAACGAGCGGAATTAGGGAAGTGGTTAACGAAAAACTTACACCCGAGCTGGCTCTAAAGGTA
GGACTGGCCCTGGGAACTTA

Product: btpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLGVTMKDLDFSKKPLIGVVHLKPLPGSPRYGGDFEEVIEWAIRDAKTYEEAGFDGIIVENFGDSPFSKTLPREVIPAFT
VVAKAVKKEVSLPLGINALRNDCIVAYSIAHAVGGSFIRVNVLTGVAFTDQGIIEGCARELWNVKRIIGGDILTLADVHV
KHAVHFTNFEDAVKDTVERGLADGIIVTGRRTGESISLEDLILAKRVSSIPVLVGSGVNPRNFRTLFKYADGFIVGTWVK
ENGKINNPVSLERAKILVRMKNSLMGV

Sequences:

>Translated_267_residues
MLGVTMKDLDFSKKPLIGVVHLKPLPGSPRYGGDFEEVIEWAIRDAKTYEEAGFDGIIVENFGDSPFSKTLPREVIPAFT
VVAKAVKKEVSLPLGINALRNDCIVAYSIAHAVGGSFIRVNVLTGVAFTDQGIIEGCARELWNVKRIIGGDILTLADVHV
KHAVHFTNFEDAVKDTVERGLADGIIVTGRRTGESISLEDLILAKRVSSIPVLVGSGVNPRNFRTLFKYADGFIVGTWVK
ENGKINNPVSLERAKILVRMKNSLMGV
>Mature_267_residues
MLGVTMKDLDFSKKPLIGVVHLKPLPGSPRYGGDFEEVIEWAIRDAKTYEEAGFDGIIVENFGDSPFSKTLPREVIPAFT
VVAKAVKKEVSLPLGINALRNDCIVAYSIAHAVGGSFIRVNVLTGVAFTDQGIIEGCARELWNVKRIIGGDILTLADVHV
KHAVHFTNFEDAVKDTVERGLADGIIVTGRRTGESISLEDLILAKRVSSIPVLVGSGVNPRNFRTLFKYADGFIVGTWVK
ENGKINNPVSLERAKILVRMKNSLMGV

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=257, Percent_Identity=27.2373540856031, Blast_Score=81, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI115532828, Length=272, Percent_Identity=30.1470588235294, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24659916, Length=261, Percent_Identity=31.0344827586207, Blast_Score=131, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 29100; Mature: 29100

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVTMKDLDFSKKPLIGVVHLKPLPGSPRYGGDFEEVIEWAIRDAKTYEEAGFDGIIVE
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
NFGDSPFSKTLPREVIPAFTVVAKAVKKEVSLPLGINALRNDCIVAYSIAHAVGGSFIRV
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEHHHHHHCCCEEEE
NVLTGVAFTDQGIIEGCARELWNVKRIIGGDILTLADVHVKHAVHFTNFEDAVKDTVERG
EEEECEEECCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEECCHHHHHHHHHHHC
LADGIIVTGRRTGESISLEDLILAKRVSSIPVLVGSGVNPRNFRTLFKYADGFIVGTWVK
CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEEE
ENGKINNPVSLERAKILVRMKNSLMGV
CCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLGVTMKDLDFSKKPLIGVVHLKPLPGSPRYGGDFEEVIEWAIRDAKTYEEAGFDGIIVE
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
NFGDSPFSKTLPREVIPAFTVVAKAVKKEVSLPLGINALRNDCIVAYSIAHAVGGSFIRV
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEHHHHHHCCCEEEE
NVLTGVAFTDQGIIEGCARELWNVKRIIGGDILTLADVHVKHAVHFTNFEDAVKDTVERG
EEEECEEECCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHEEEECCHHHHHHHHHHHC
LADGIIVTGRRTGESISLEDLILAKRVSSIPVLVGSGVNPRNFRTLFKYADGFIVGTWVK
CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEEE
ENGKINNPVSLERAKILVRMKNSLMGV
CCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA