| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is rmf [H]
Identifier: 326424049
GI number: 326424049
Start: 2666517
End: 2666690
Strand: Reverse
Name: rmf [H]
Synonym: NA
Alternate gene names: 326424049
Gene position: 2666690-2666517 (Counterclockwise)
Preceding gene: 27365924
Following gene: 27365920
Centisome position: 81.26
GC content: 45.98
Gene sequence:
>174_bases ATGAAGAGACAAAAGCGTGATCGCCTAGAACGAGCACAATCCCAAGGCTACAAGGCAGGCTTAAACGGTAGATCTCAGGA AGAATGTCCTTATCAACAGATGGACGCTCGTTCGTATTGGTTAGGTGGTTGGCGTGATGCCAGAAGTGACAAACTTTCTG GTCTCTATAAATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: ribosome modulation factor
Products: NA
Alternate protein names: Protein E [H]
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
NA
Sequences:
>Translated_57_residues MKRQKRDRLERAQSQGYKAGLNGRSQEECPYQQMDARSYWLGGWRDARSDKLSGLYK >Mature_57_residues MKRQKRDRLERAQSQGYKAGLNGRSQEECPYQQMDARSYWLGGWRDARSDKLSGLYK
Specific function: Associates with 70S ribosomes and converts them to a dimeric form (100S ribosomes) which appears during the transition from the exponential growth phase to the stationary phase of E.coli cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787186, Length=52, Percent_Identity=65.3846153846154, Blast_Score=77, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007040 - InterPro: IPR023200 - ProDom: PD051650 [H]
Pfam domain/function: PF04957 RMF [H]
EC number: NA
Molecular weight: Translated: 6755; Mature: 6755
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQKRDRLERAQSQGYKAGLNGRSQEECPYQQMDARSYWLGGWRDARSDKLSGLYK CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRQKRDRLERAQSQGYKAGLNGRSQEECPYQQMDARSYWLGGWRDARSDKLSGLYK CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]