Click here to switch to the map view.

The map label for this gene is ycbG [C]

Identifier: 27365920

GI number: 27365920

Start: 2663502

End: 2663951

Strand: Reverse

Name: ycbG [C]

Synonym: VV1_2627

Alternate gene names: 27365920

Gene position: 2663951-2663502 (Counterclockwise)

Preceding gene: 326424049

Following gene: 27365919

Centisome position: 81.17

GC content: 40.67

Gene sequence:

>450_bases
ATGAAATATCAACAACTCGAAAACTTGGAATGTGGGTGGAAATGGCAGTATTTGATCAATAAGTGGAAAGATGGAGAAAC
CATCACTAAATATATTGATTCGAGTGAAGCTGACCATGCAGTTTCTGAACTAAGAAAGTTAGAACATGAACCGACCAAAG
TCCTCGAGTGGATTGATTTGCACATGGCGGAGGAGTTGGACAAGAAACTCAAACAAGCCATTCGTGGTAAACGCAAGCGC
CATTTCAATGCTGAGCAGATCCATACAAAGAAAAAATCCATCGATTTAGATTATCGTGTGTGGGAAAAGCTATCGACACG
TGCGAATGAATTGGGTTGTACTTTGTCTGATGCCATTGAATATTTACTGAGTGAAGCTTCTCGTAGCGAAAAAGCGAGTG
CAGCCGTATCGACTCTGAAAGAAGACTTAAGCAAGTTATTATCCGATTAG

Upstream 100 bases:

>100_bases
GGAAAAAGTTGATCTCTCTCTATCCTTCGACCACGTTTTGTTGAGAATTAAACCCACATGGGTTACGCTGTCACCCTAAG
TAGCGCTAGGACATGGAAAA

Downstream 100 bases:

>100_bases
TGCAGGAGAACACACATGTTGTATGTCATTATCGTTGCCGCTATCGTTATCTTTTGGCTAGTGGCCATTGACCGCCCCGT
ATTGAAAGTTTCCTTTAAAG

Product: Ter macrodomain organizer matS-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRGKRKR
HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD

Sequences:

>Translated_149_residues
MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRGKRKR
HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD
>Mature_149_residues
MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDLHMAEELDKKLKQAIRGKRKR
HFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIEYLLSEASRSEKASAAVSTLKEDLSKLLSD

Specific function: Unknown

COG id: COG3120

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0268 family [H]

Homologues:

Organism=Escherichia coli, GI1787190, Length=148, Percent_Identity=54.0540540540541, Blast_Score=160, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009390
- ProDom:   PD033720 [H]

Pfam domain/function: PF06303 DUF1047 [H]

EC number: NA

Molecular weight: Translated: 17437; Mature: 17437

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDL
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
HMAEELDKKLKQAIRGKRKRHFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
YLLSEASRSEKASAAVSTLKEDLSKLLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYQQLENLECGWKWQYLINKWKDGETITKYIDSSEADHAVSELRKLEHEPTKVLEWIDL
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH
HMAEELDKKLKQAIRGKRKRHFNAEQIHTKKKSIDLDYRVWEKLSTRANELGCTLSDAIE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
YLLSEASRSEKASAAVSTLKEDLSKLLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA