| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 326424046
Identifier: 326424046
GI number: 326424046
Start: 2634222
End: 2635742
Strand: Reverse
Name: 326424046
Synonym: NA
Alternate gene names: NA
Gene position: 2635742-2634222 (Counterclockwise)
Preceding gene: 27365891
Following gene: 27365880
Centisome position: 80.31
GC content: 42.67
Gene sequence:
>1521_bases GTGAGTAAATATTTTGCTTTATCTCCATTACTGCTATCTCTTCTGTCGACTGAAGTAATAGCAAGTTCTTGCCAAATTCA AGGTTACACTATCGCTTTTTTTAACGGAGTTGCAACCTCACGAAAAGAAGCATCTTTGGGATTGAAAGAGATAAAAAGTA CTCTTGCCATCCAACAATATCGAGGTCAACCGGTTGAATACGCTCTGTTCTACAACGACTCCAATTACAAAGAAAGGGGG ATTGATGTACTAGCCGACTTTGCTGAGACCTTCGATCAACGAACTAACGAGCTGGAGCAAAAGCAGTTTGAGCGATGGGA AGCTTTTTGGGATGTCGTAAGCGGTAGAAATAACAGCCCAATCATTAAAAAAATTGACTCACTAGTAAAAGGTTTCCTTG CCTTCGTGAATGATACCTTAAGCCGAGGTATCAACGAGATTATTCATGAGTTTTTGGAAGGTTTGGCGTCTTTGGCGGGG AGTGATATCAACACTGACGAGGTTCGAATGAAACATCGTCTTCGTAATGACTCACAGACTTGGCAAGGTAAAAAACTGAT TTATTTGGCCCATTCACAGGGCAACCTTTGGGTAAATGAGTCATTCCATTATGTCAATCAGCGTTTGGGCTATGATGAAA CGAATATTAAAGTTATCCATATTGCCCCCGCTTCTCCGACGCTTAACGGCGACTACATTCTATCGGACAAAGATCATGTC ATAAACGGATTGAACTTTACTGGAATTGGTTCAGTACCGTTTCCAAACATAAGTATCCCGACAAGCGATAAAGATAGTTT GGGACATGGATTGGTGGAAATATATCTTACCAATCAACAAACCAAACAGATGATCAAAGACGCGGTAGACAAAGCGCTGG ATAGCGTCAAATCTCCAGCAATGGAAGATTACTTATTTGATATTCGCTTCGAATACTCAGAAAACTACTTGAAAGCGCAT CGCCCACCGAAAATTGCCTTTGTCGACAGTTTAGAAAGCAGGGACTATTGTGGCTTATCGAACGTAGATTATTTTTTCGA TTTCTATGGTGCATGTGGTAACTACTATCGAGCGGTTGAAGATGCTGGTAGTCCTTATATCACTAGTGAGAGAGAACTTG TTGTCTCCAAGAAGAACCCTGTACTTATTCCGCTCACCATACCTGATGGCCAACAGCCGTATCACCTTCAAGTGCAAGAA TGCCTTGCTATTCCGCCAGCGGGATCTTTTCTGTTGGGTGAAATTGCAGGCATTTACGATCTTGAAGCGCCCTTCGATCT TACCGCTAAACTCGTGGTTACCGATCGATTTGGACGAGAGTATGATATTGATGACAGAGATGTCAGCCCGCACATAGAAG GTGGGTACCTTAAGTGTGCTGGTACCGGGTCTTTCAGTGAACTGGTAGCGATACAATCTGGGTATAGCGATGATGAAAAA CGGTACCTTAAGACCGAACAGCTTACTGGTACGTATGAGTTGAGTGCACAAAAAATCTGGCATCATTGCGGAGGACATTG A
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
NA
Sequences:
>Translated_506_residues MSKYFALSPLLLSLLSTEVIASSCQIQGYTIAFFNGVATSRKEASLGLKEIKSTLAIQQYRGQPVEYALFYNDSNYKERG IDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAG SDINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAH RPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQE CLAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK RYLKTEQLTGTYELSAQKIWHHCGGH >Mature_505_residues SKYFALSPLLLSLLSTEVIASSCQIQGYTIAFFNGVATSRKEASLGLKEIKSTLAIQQYRGQPVEYALFYNDSNYKERGI DVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSPIIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGS DINTDEVRMKHRLRNDSQTWQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHVI NGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPAMEDYLFDIRFEYSENYLKAHR PPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVEDAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQEC LAIPPAGSFLLGEIAGIYDLEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEKR YLKTEQLTGTYELSAQKIWHHCGGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56934; Mature: 56803
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYFALSPLLLSLLSTEVIASSCQIQGYTIAFFNGVATSRKEASLGLKEIKSTLAIQQY CCCCHHHHHHHHHHHHHHHHHHCCEECCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHH RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCCEE LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH RYLKTEQLTGTYELSAQKIWHHCGGH HHHHHHHCCCEEEHHHHHHHHHCCCC >Mature Secondary Structure SKYFALSPLLLSLLSTEVIASSCQIQGYTIAFFNGVATSRKEASLGLKEIKSTLAIQQY CCCHHHHHHHHHHHHHHHHHHCCEECCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHH RGQPVEYALFYNDSNYKERGIDVLADFAETFDQRTNELEQKQFERWEAFWDVVSGRNNSP CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH IIKKIDSLVKGFLAFVNDTLSRGINEIIHEFLEGLASLAGSDINTDEVRMKHRLRNDSQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC WQGKKLIYLAHSQGNLWVNESFHYVNQRLGYDETNIKVIHIAPASPTLNGDYILSDKDHV CCCCEEEEEEECCCCEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEECCCHHH INGLNFTGIGSVPFPNISIPTSDKDSLGHGLVEIYLTNQQTKQMIKDAVDKALDSVKSPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCC MEDYLFDIRFEYSENYLKAHRPPKIAFVDSLESRDYCGLSNVDYFFDFYGACGNYYRAVE HHHEEEEEEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH DAGSPYITSERELVVSKKNPVLIPLTIPDGQQPYHLQVQECLAIPPAGSFLLGEIAGIYD HCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEHHHHHCCCCCCCHHHHHHCCCEE LEAPFDLTAKLVVTDRFGREYDIDDRDVSPHIEGGYLKCAGTGSFSELVAIQSGYSDDEK CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHH RYLKTEQLTGTYELSAQKIWHHCGGH HHHHHHHCCCEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA