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The map label for this gene is fdhD [H]

Identifier: 27365880

GI number: 27365880

Start: 2624271

End: 2625098

Strand: Reverse

Name: fdhD [H]

Synonym: VV1_2584

Alternate gene names: 27365880

Gene position: 2625098-2624271 (Counterclockwise)

Preceding gene: 326424046

Following gene: 27365879

Centisome position: 79.99

GC content: 44.81

Gene sequence:

>828_bases
GTGGTCAAACCCAACATTATTAAAACCAGTGAAAACCCTTTGCAAACCATTGAAGTGGAAGTATTCGATGAATATGGAGA
GAAGTTAATTAAGCAAATTGCTTGTGAGCGCCCTTTAACCGTTCTTCTGAACTGGAAAGAAGTGGTGACGCTAATGACAC
TGGGCTCGAGACCTGAAGCACTCGTTTTGGGCTATCTCAAGAACCAAAGCTTCTTGTCGGAAGTTGATTCTCTTGAATCG
GTGATCATCGATTGGGAAACCAACAGCGCAGCGGTAGTGACAAAAGAGAATGTAGAACACATTGAACAGGCTTTAAAAAA
GAAAACTGTTACCTCAGGGTGTGGGCAAGGCACTATGTATGGCAACGTGATGAAACAACTAGAGCACTATCAAGTGCCCC
AAGTGACACTTAAACAGTCGGATATTTACAAGACCTTAGAAGCGCTCACCCACTACAACGATACCTACAAAAAAGCAGGT
GCAGTACACGGATGTGCGGTGTGCAAAGGCGATGAAGTTCGCTCGTTTGTCGAAGATGTTGGCCGTCACAACGCAGTGGA
TACGCTTGCCGGTGAAATGTGGTTAAACCAAGAATCGGGCGCGGATAAGATTTTCTATACCACAGGCCGTCTCACTTCAG
AAATGGTGATCAAAGTGGCTCAAATGGGCATCCCTGTTTTGCTCTCTCGCTCTGGTGTCACGCAGATGGGTTTAGATTTA
GCACGTCAATTTGGTATTACCACCATCGCACGAGCAAAAGGCTTGCGCTTTCAAGTCTTTACTGGTGGTGAAAACATCAT
TTTTGATGTCAAAGGTAAAGAGAGTTAA

Upstream 100 bases:

>100_bases
TGGAACGGTAATTGCTATTGAATTGATTTTGTTCCCCCGCCTTTGGCAAACGTGTTTCTTCGGTGATTCTTGATATCACC
CATTCAAGCAGGAAAAAGAA

Downstream 100 bases:

>100_bases
ATCGCCTTACTTGCAAAACGCCTCCCATGCGCTATTAGTTGAGTATTCTCTGCAATAAATTTGAAACATAAATGAAACAA
AAGCGGAGATGGGTTAACTA

Product: Formate dehydrogenase chain D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MVKPNIIKTSENPLQTIEVEVFDEYGEKLIKQIACERPLTVLLNWKEVVTLMTLGSRPEALVLGYLKNQSFLSEVDSLES
VIIDWETNSAAVVTKENVEHIEQALKKKTVTSGCGQGTMYGNVMKQLEHYQVPQVTLKQSDIYKTLEALTHYNDTYKKAG
AVHGCAVCKGDEVRSFVEDVGRHNAVDTLAGEMWLNQESGADKIFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
ARQFGITTIARAKGLRFQVFTGGENIIFDVKGKES

Sequences:

>Translated_275_residues
MVKPNIIKTSENPLQTIEVEVFDEYGEKLIKQIACERPLTVLLNWKEVVTLMTLGSRPEALVLGYLKNQSFLSEVDSLES
VIIDWETNSAAVVTKENVEHIEQALKKKTVTSGCGQGTMYGNVMKQLEHYQVPQVTLKQSDIYKTLEALTHYNDTYKKAG
AVHGCAVCKGDEVRSFVEDVGRHNAVDTLAGEMWLNQESGADKIFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
ARQFGITTIARAKGLRFQVFTGGENIIFDVKGKES
>Mature_275_residues
MVKPNIIKTSENPLQTIEVEVFDEYGEKLIKQIACERPLTVLLNWKEVVTLMTLGSRPEALVLGYLKNQSFLSEVDSLES
VIIDWETNSAAVVTKENVEHIEQALKKKTVTSGCGQGTMYGNVMKQLEHYQVPQVTLKQSDIYKTLEALTHYNDTYKKAG
AVHGCAVCKGDEVRSFVEDVGRHNAVDTLAGEMWLNQESGADKIFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
ARQFGITTIARAKGLRFQVFTGGENIIFDVKGKES

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30510; Mature: 30510

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPNIIKTSENPLQTIEVEVFDEYGEKLIKQIACERPLTVLLNWKEVVTLMTLGSRPEA
CCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCE
LVLGYLKNQSFLSEVDSLESVIIDWETNSAAVVTKENVEHIEQALKKKTVTSGCGQGTMY
EEEEEHHCHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHH
GNVMKQLEHYQVPQVTLKQSDIYKTLEALTHYNDTYKKAGAVHGCAVCKGDEVRSFVEDV
HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCHHHHHHHHHH
GRHNAVDTLAGEMWLNQESGADKIFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
HCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
ARQFGITTIARAKGLRFQVFTGGENIIFDVKGKES
HHHHCCHHHHHCCCCEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MVKPNIIKTSENPLQTIEVEVFDEYGEKLIKQIACERPLTVLLNWKEVVTLMTLGSRPEA
CCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCE
LVLGYLKNQSFLSEVDSLESVIIDWETNSAAVVTKENVEHIEQALKKKTVTSGCGQGTMY
EEEEEHHCHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHH
GNVMKQLEHYQVPQVTLKQSDIYKTLEALTHYNDTYKKAGAVHGCAVCKGDEVRSFVEDV
HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCHHHHHHHHHH
GRHNAVDTLAGEMWLNQESGADKIFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
HCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
ARQFGITTIARAKGLRFQVFTGGENIIFDVKGKES
HHHHCCHHHHHCCCCEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA