Click here to switch to the map view.

The map label for this gene is 326423968

Identifier: 326423968

GI number: 326423968

Start: 2214286

End: 2215215

Strand: Reverse

Name: 326423968

Synonym: NA

Alternate gene names: NA

Gene position: 2215215-2214286 (Counterclockwise)

Preceding gene: 27365539

Following gene: 27365536

Centisome position: 67.5

GC content: 48.06

Gene sequence:

>930_bases
ATGAAACTCGATAACAGCCCCATTACTCAACATTGTTACGCCGGTCATACCTTTTACCTAAAACGTGACGACTTGTTGCA
TTCCCACTTTACCGGGAATAAGGCAAGAAAATTCATGAGCTTATTGAACGCCAATTTGCCCAATATCACCACTCTGATCA
GTTATGGCTCCGCGCAAGCAAACTCTCTCTTTTCTTTGGCCGCGCTGGCACGCATAAAAGGTTGGAAACTCGAGTTTTAT
GTCGACCACTTACCGGAATGGCTACGCTTACGCCCACAAGGTAACTATCGTGGCGCGTTAGAGCTCGGCGCGGAGATCAT
CGAGGTTTCTCAACACACCCCCGGCATGCATCCTCAGCAATACATCGAACAAGTAAGACAACCATCAGATGCCTGCTATG
TCGTTCCAGAAGGTGGGCGCTTTGAACTGGCAGAAGAAGGCATCAAACAGTTGGCTTTGGAACTGTTGGCTTGGTCACGC
TTTGAACCGTCGAAACAATTTGTCATCGCGCTCCCGTCAGGAACCGGCACCACCGCACTTTATCTGCACAAATACCTTAA
ACCTCATGGCATCGATGTTTTGACCTGTGCGTGTGTCGGAGGCGACAGCTACCTCACCAGCCAATTTGAGCAACTAGGCG
AAACAGACCATCCCCAGATCCTTACCTCAGCCAACAAGCACCATTTCGGCAAGCTGTACAAAGAGGACTACCAAACCTGG
TTGTCTCTACTCAATCACACCGATATTGAGTTTGACCTCCTTTACGACCCGCTCATGTGGCGCTGCTTGCTCCCTTGGTT
AGAGGAGAATAAAGATAAAACGCTGCTTTATATTCACCAAGGAGGCTTGTTAGGAAATGAGTCAATGCTGCCAAGATATC
AGCGAAAATTCCCACTAGAAGAGAATTTACCCTCCGCTATCGATAAATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: ACC deaminase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:
NA

Sequences:

>Translated_309_residues
MKLDNSPITQHCYAGHTFYLKRDDLLHSHFTGNKARKFMSLLNANLPNITTLISYGSAQANSLFSLAALARIKGWKLEFY
VDHLPEWLRLRPQGNYRGALELGAEIIEVSQHTPGMHPQQYIEQVRQPSDACYVVPEGGRFELAEEGIKQLALELLAWSR
FEPSKQFVIALPSGTGTTALYLHKYLKPHGIDVLTCACVGGDSYLTSQFEQLGETDHPQILTSANKHHFGKLYKEDYQTW
LSLLNHTDIEFDLLYDPLMWRCLLPWLEENKDKTLLYIHQGGLLGNESMLPRYQRKFPLEENLPSAIDK
>Mature_309_residues
MKLDNSPITQHCYAGHTFYLKRDDLLHSHFTGNKARKFMSLLNANLPNITTLISYGSAQANSLFSLAALARIKGWKLEFY
VDHLPEWLRLRPQGNYRGALELGAEIIEVSQHTPGMHPQQYIEQVRQPSDACYVVPEGGRFELAEEGIKQLALELLAWSR
FEPSKQFVIALPSGTGTTALYLHKYLKPHGIDVLTCACVGGDSYLTSQFEQLGETDHPQILTSANKHHFGKLYKEDYQTW
LSLLNHTDIEFDLLYDPLMWRCLLPWLEENKDKTLLYIHQGGLLGNESMLPRYQRKFPLEENLPSAIDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =3.5.99.7 [H]

Molecular weight: Translated: 35317; Mature: 35317

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDNSPITQHCYAGHTFYLKRDDLLHSHFTGNKARKFMSLLNANLPNITTLISYGSAQA
CCCCCCCCCHHHHCCCEEEEECCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHH
NSLFSLAALARIKGWKLEFYVDHLPEWLRLRPQGNYRGALELGAEIIEVSQHTPGMHPQQ
HHHHHHHHHHHHCCCEEEEEHHHCCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
YIEQVRQPSDACYVVPEGGRFELAEEGIKQLALELLAWSRFEPSKQFVIALPSGTGTTAL
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
YLHKYLKPHGIDVLTCACVGGDSYLTSQFEQLGETDHPQILTSANKHHFGKLYKEDYQTW
HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHH
LSLLNHTDIEFDLLYDPLMWRCLLPWLEENKDKTLLYIHQGGLLGNESMLPRYQRKFPLE
HHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCC
ENLPSAIDK
CCCCHHHCC
>Mature Secondary Structure
MKLDNSPITQHCYAGHTFYLKRDDLLHSHFTGNKARKFMSLLNANLPNITTLISYGSAQA
CCCCCCCCCHHHHCCCEEEEECCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHH
NSLFSLAALARIKGWKLEFYVDHLPEWLRLRPQGNYRGALELGAEIIEVSQHTPGMHPQQ
HHHHHHHHHHHHCCCEEEEEHHHCCHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
YIEQVRQPSDACYVVPEGGRFELAEEGIKQLALELLAWSRFEPSKQFVIALPSGTGTTAL
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHH
YLHKYLKPHGIDVLTCACVGGDSYLTSQFEQLGETDHPQILTSANKHHFGKLYKEDYQTW
HHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHH
LSLLNHTDIEFDLLYDPLMWRCLLPWLEENKDKTLLYIHQGGLLGNESMLPRYQRKFPLE
HHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCC
ENLPSAIDK
CCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]