| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is dinG [H]
Identifier: 326423941
GI number: 326423941
Start: 2113681
End: 2115792
Strand: Reverse
Name: dinG [H]
Synonym: NA
Alternate gene names: 326423941
Gene position: 2115792-2113681 (Counterclockwise)
Preceding gene: 27365449
Following gene: 27365445
Centisome position: 64.47
GC content: 45.93
Gene sequence:
>2112_bases GTGCTAGAATCCGTGGGTCTGAACATGGGTCACAGTATGCTAACCAGTAAAATTCAAAGTTCTATTCGCACCAGCTATCA AAACCTTCAAAACCAGCTTGAAAACTTTATTCCTCGCCGAGCGCAAAACTATCTCGTTGCGGAGATGGCAAAAACACTTT GTGGTTCCTATCACAAAAAAAATCGCATTCTTGTTGCGGAAGCCGGGACGGGGATCGGGAAATCACTCTCCTACCTTATG GCTGCAATCCCAGTGGCAGTACTTAACAACCGTAAAGTGGTGATTTCAACTGCAACAGTTGCTCTACAAGAGCAATTGCT GAATAAAGACCTGCCTTTGTACAGAAGAATTTCAGACTTAAACTTTTCTTTTGTTTTAGCGAAAGGCAGACAACGCTATT GCTGTGCCGAAAAACTCGCTAGCGCCAGTGGCGTCGACGGTGGCCAGCTAGCGATGTTTGAAACAAAACCCAAAAAGAAA GACATAGAGCTGTTAACCACGATGTATCAGAGCTTAGCCAAGGGGAAATGGGATGGCGATAGAGACAGTTGGCCAAAACC GATTGATGACAGCCTCTGGCAATTGATTGTCAGCGACAAACATAGCTGTAACAACAATCTGCCGATTCATCGCCACTGTC CTTTTCAAAAAGCACGCTCAGAGCTCGACAAGCACGATGTCATTATTGCCAATCACAGTTTAGTCATGGCTGATGCAGAC TTGGGCGGCGGCGTTATCCTCTCTGAACCGGAAAATACCATTTATGTCTTTGATGAAGCGCACCACCTTCCTCACGTTGC TCGAGATCATGCCTCTGCCGCATCTAGCCTTAAAGGCGCGGCCGCTTGGTTAGAACGTTTAAACCAAAACAGCAGCAAGT TTGCAGCCTTGGCGGATGAAAAACGCGTTAGCCGCTTTCGCAATGAGCTTCAAGAATCCGTGCAAGTAGTGATTCCCTCT TTACTACAGCTTGCAAAACAGTTCGACCCAGCGAATTTTGAGGAAGGCACCTATCGATTTGAGCATGGCCAACTCCCTTC GTGGCTAGAAGAGCAGGCAAAAGAGCTCAAAATTTTCAGCCAGAAAGCCCATCAAGCGGTCGCTAAAATTGCCGATCTCG TCGCCGAACGTGTTAAAGATGGTGAACTTTCCGCAAAAACTGCCGAGCCCGCTTTGGCTGAATTGGGTTTCTATATTCAA CGAACTGAAAATCTGTCACAAGTGTGGCGATTGATGGCAGAACCGACCCGTGAAAAAGGAGCGCCTCTTGCTCGCTGGCT TGAAAAACATCCGGATCGCGAAGGTGATGTTATCGTCAGTGTCTCTCCTTTAGAGGTAGGCTGGCAGCTGGACCAACAAA TCTGGAGTCGCTGCGTCGGCGCATTGTTGGTTTCTGCAACCATGAGAGCACTGAACTCATTTCAATATTTCTGTCATCAA GCAGGCATTGATATGCGTGAGGAATCGGGAGTCCAATTCCTAGCTTTGGCCTCACCTTTCGATTATCAAAACCAAGCAGA GTTGCACCTACCTGCCCTCAAATACGAACCGCAAGCACCGCAGTTTACGGAATATCTTATCGAGATTTTGCCTAAGTATT TAAAAGACAAACAGGCAAACTTGGTTTTATTCTCTTCTTATTGGCAAATGAACCAAGTTGCGGAAGGTTTAGCAACAGAA TTGGTAAAAAGAGGATGGGCTTTGCAAAAGCAAGGCGAAACATCACGCACTGAAATTCTAAAAAAACATAAAGAACTAGT AGAAAAAGGTGAAACAAGCATTCTTTTTGGTACAGGTAGCTTTTCAGAGGGGCTGGATTTGCCCGGCGAGCTTCTGGAAA ACTTGGTGATCACCAAAATACCTTTTGCTGTCCCAACTTCACCAGTAGAACAAGCGCATTCAGAATATATTGAGTCTCGT GGAGGTAATCCATTTATGCAGATCACTGTCCCAGAGGCGAGTAAGAAGATGATTCAATCGGTAGGACGATTACTGCGCAA AGAGCGAGATTCTGGTACAGTCACCATCCTCGACAAGAGGTTGATTTCGAAGCGGTATGGTAAAGCGATTCTGGACTCCC TGCCTCCTTTTAAACGAATCATTGAAAAATAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: ATP-dependent helicase DinG/Rad3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
NA
Sequences:
>Translated_703_residues MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKKNRILVAEAGTGIGKSLSYLM AAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDLNFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKK DIELLTTMYQSLAKGKWDGDRDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADEKRVSRFRNELQESVQVVIPS LLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFSQKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQ RTENLSQVWRLMAEPTREKGAPLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQANLVLFSSYWQMNQVAEGLATE LVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGSFSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESR GGNPFMQITVPEASKKMIQSVGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK >Mature_703_residues MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKKNRILVAEAGTGIGKSLSYLM AAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDLNFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKK DIELLTTMYQSLAKGKWDGDRDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADEKRVSRFRNELQESVQVVIPS LLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFSQKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQ RTENLSQVWRLMAEPTREKGAPLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQANLVLFSSYWQMNQVAEGLATE LVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGSFSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESR GGNPFMQITVPEASKKMIQSVGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=33.8440111420613, Blast_Score=340, Evalue=2e-94, Organism=Escherichia coli, GI1788110, Length=692, Percent_Identity=27.6011560693642, Blast_Score=207, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010614 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 78902; Mature: 78902
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NRILVAEAGTGIGKSLSYLMAAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDL CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCC NFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKKDIELLTTMYQSLAKGKWDGD CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC RDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECC LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADE CCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KRVSRFRNELQESVQVVIPSLLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH QKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQRTENLSQVWRLMAEPTREKG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC APLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ CHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQAN CCCCCCHHCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC LVLFSSYWQMNQVAEGLATELVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGS EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC FSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESRGGNPFMQITVPEASKKMIQS CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH VGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NRILVAEAGTGIGKSLSYLMAAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDL CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCC NFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKKDIELLTTMYQSLAKGKWDGD CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC RDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECC LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADE CCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KRVSRFRNELQESVQVVIPSLLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH QKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQRTENLSQVWRLMAEPTREKG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC APLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ CHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQAN CCCCCCHHCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC LVLFSSYWQMNQVAEGLATELVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGS EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC FSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESRGGNPFMQITVPEASKKMIQS CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH VGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396546; 8385320 [H]