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The map label for this gene is 326423904

Identifier: 326423904

GI number: 326423904

Start: 1888021

End: 1890045

Strand: Reverse

Name: 326423904

Synonym: NA

Alternate gene names: NA

Gene position: 1890045-1888021 (Counterclockwise)

Preceding gene: 27365242

Following gene: 27365240

Centisome position: 57.59

GC content: 44.74

Gene sequence:

>2025_bases
TTGAGTAAAAAGCCAGCGGCACGCATCTCCGATTTTCACGTCTGCCCTAAAAAGACGGGTAAAGTGCCCCATGTGGGGGG
ACCAATCGTTAACGGCTCTCCAAATGTGTTCATTGAGGGGCTTCCAGCTGCGCGTGAAGGCGATTCAATCGTATGTGTAG
GCCCAGCAGATAGTATATCTGGTGGATCATCGTCAGTTTTTATTAACGGTAAACCCGCTGCAAGACTGGGCGATAGTTCA
TCCCATGGCGGGGTTATAATTAGCGGTGCAGGAACAGTGCTTATCGGAGATGCAGGGATTGTCGTCCAACCCTCTCCTGC
GCCTAAAAGCTCTTCCACATCTGCTAAAGAAAGTACCGCAGAGAGCGCAAGCTCGCTGGCTACATCACAAAGCCATCAAC
CATTATTGCAATCTTCCCTATCTGATCAATTCCAACAGCATGAAGATATAACGGCTAGAACAGACGGCGAAAGCTTTGCA
ACAGAAGCAGAGAAAGAAGAGTTCAGTTGGGTCAAGATCCGGTTGGAATATGATGATCTTTGGAATACCGCGATTCCGTT
TTATAGCTCGGTCATTAGCACTGAGTCCAGCGATGGCTCTCAGAAACTCGTTCACGAAGTAGAGGCTTCAACAAAGCACA
CGAAGGGAACCACAAAACGCAACTCTGACCATTACGAAGTACAAGAAGCAAAACAATCTGAACAATTTGAACCCGGTGTC
CACGTTATTGAAAATATTCCTCTCGAACAAACCAAGGTTCTTGTTGATGTGCTTGGGAAGAGTGGTTCTGCTAGTGAAAT
AAAACAGTTAACTGATGAGTTACACAAAGAACTCGATAGTATCTTTACATCGGTCTCAGACAGCATGAAACCATTCAATG
AAGCATGGGCAGAACGAGGATGGCTAACTCTTGCCGACGGCGTTTACGATGGTGCTGTTGCATGGAGCTCTGATCAACTG
GATTTGTTTACACCAGAGCTTTGGGGAGAACTTGGCGATACCTTATCCGAAGGGTTGTCACGCGGTTGGGATTCATTAGG
CGAATATGCATCAAGCATACAGAATAAAATTGACCACCGATTTATTCAGGCTCGTACAAACATCATCAATGGAATCCGCG
CAATAAAATATGATGAGCGCGGTAAGGCGATAGAGAGTAACTGGCTGGAGACACTACAAGCTGACTCGCATGTCTTCGCC
ATTGGTGTAACAGAAATGACCAAGCTTTATTCTGGCATTGCTTATGATGTTGTTGTTGAGCCACTAGTACCTGACTCGAT
AGAAATTTTCTTTGCTGAACATAGCCCACTCGATATTTACAACAAAGCCGTCAACTCCGCTGAAGAGTTAAGTGTTTACG
TAAAATACAGAGAGGAGATATTTGCATTAATTGGCCATATCAGACAACGAAAAGTGAAAGAAATCCAACGATTTATAGAG
TCAACACTAGACGAAATTGATCCAGACTTAGCTCAAAAGTTACGTAACAGTTCAGATTTCCACTTGTTCATTGCGTTGTT
AGAAGAAGATGACAGTGTCTTGCTTTACCTCGACTACATCATGCGTATTTTTGAAGAGATCCCACCTAATTTTTATACCT
ACTGTCTAGGAAAAGCTGGCATTTACATCGCTCTCGAAGTTTTGTTGGTATTGCTACTTGGTCTGATCTCGGTCGGAGCA
GGAGCCGCCGTCAAAGCCGCAGCAACGTCTCAAAAAGTAGCGAAATACTCAAATATGTTTGCCAAGGCAGTAAGCCACAA
CAAAGCGGTACAAAACATGCGAAGTGGACTTAACGCAGTTTTGAGTGCATTTGAGCAACTTCTTGCACTGTTCGAAAAAC
TGAAAAAAATCGCGATTGCAAGATCCAAAGCACTATCAACGACATTCACGGGTTGGACCAATCGAACGGTGAAAAAGAGC
GTTTCGACGCCAAAACGTGATGACAAACCACCAAGATGTCGCGTGTGCGGAAAAACAGGCCACGATACTAAGCCCGTCAG
AGCCGGGAGATTAAATTATGCGTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System Protein EvpJ; S-Type Pyocin Domain Protein; Type VI Secretion PAAR Domain Protein; PAAR Motif Family; Helix-Turn-Helix AraC Type; Paar Domain-Containing Protein; PAAR Domain-Containing Protein Containing Protein; Phosphomethylpyrimidine Kinase; Superfamily II DNA Helicase

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:
NA

Sequences:

>Translated_674_residues
MSKKPAARISDFHVCPKKTGKVPHVGGPIVNGSPNVFIEGLPAAREGDSIVCVGPADSISGGSSSVFINGKPAARLGDSS
SHGGVIISGAGTVLIGDAGIVVQPSPAPKSSSTSAKESTAESASSLATSQSHQPLLQSSLSDQFQQHEDITARTDGESFA
TEAEKEEFSWVKIRLEYDDLWNTAIPFYSSVISTESSDGSQKLVHEVEASTKHTKGTTKRNSDHYEVQEAKQSEQFEPGV
HVIENIPLEQTKVLVDVLGKSGSASEIKQLTDELHKELDSIFTSVSDSMKPFNEAWAERGWLTLADGVYDGAVAWSSDQL
DLFTPELWGELGDTLSEGLSRGWDSLGEYASSIQNKIDHRFIQARTNIINGIRAIKYDERGKAIESNWLETLQADSHVFA
IGVTEMTKLYSGIAYDVVVEPLVPDSIEIFFAEHSPLDIYNKAVNSAEELSVYVKYREEIFALIGHIRQRKVKEIQRFIE
STLDEIDPDLAQKLRNSSDFHLFIALLEEDDSVLLYLDYIMRIFEEIPPNFYTYCLGKAGIYIALEVLLVLLLGLISVGA
GAAVKAAATSQKVAKYSNMFAKAVSHNKAVQNMRSGLNAVLSAFEQLLALFEKLKKIAIARSKALSTTFTGWTNRTVKKS
VSTPKRDDKPPRCRVCGKTGHDTKPVRAGRLNYA
>Mature_673_residues
SKKPAARISDFHVCPKKTGKVPHVGGPIVNGSPNVFIEGLPAAREGDSIVCVGPADSISGGSSSVFINGKPAARLGDSSS
HGGVIISGAGTVLIGDAGIVVQPSPAPKSSSTSAKESTAESASSLATSQSHQPLLQSSLSDQFQQHEDITARTDGESFAT
EAEKEEFSWVKIRLEYDDLWNTAIPFYSSVISTESSDGSQKLVHEVEASTKHTKGTTKRNSDHYEVQEAKQSEQFEPGVH
VIENIPLEQTKVLVDVLGKSGSASEIKQLTDELHKELDSIFTSVSDSMKPFNEAWAERGWLTLADGVYDGAVAWSSDQLD
LFTPELWGELGDTLSEGLSRGWDSLGEYASSIQNKIDHRFIQARTNIINGIRAIKYDERGKAIESNWLETLQADSHVFAI
GVTEMTKLYSGIAYDVVVEPLVPDSIEIFFAEHSPLDIYNKAVNSAEELSVYVKYREEIFALIGHIRQRKVKEIQRFIES
TLDEIDPDLAQKLRNSSDFHLFIALLEEDDSVLLYLDYIMRIFEEIPPNFYTYCLGKAGIYIALEVLLVLLLGLISVGAG
AAVKAAATSQKVAKYSNMFAKAVSHNKAVQNMRSGLNAVLSAFEQLLALFEKLKKIAIARSKALSTTFTGWTNRTVKKSV
STPKRDDKPPRCRVCGKTGHDTKPVRAGRLNYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73696; Mature: 73564

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKPAARISDFHVCPKKTGKVPHVGGPIVNGSPNVFIEGLPAAREGDSIVCVGPADSIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCC
GGSSSVFINGKPAARLGDSSSHGGVIISGAGTVLIGDAGIVVQPSPAPKSSSTSAKESTA
CCCCEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEECCCCCCCCCCCCHHHHHH
ESASSLATSQSHQPLLQSSLSDQFQQHEDITARTDGESFATEAEKEEFSWVKIRLEYDDL
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHH
WNTAIPFYSSVISTESSDGSQKLVHEVEASTKHTKGTTKRNSDHYEVQEAKQSEQFEPGV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH
HVIENIPLEQTKVLVDVLGKSGSASEIKQLTDELHKELDSIFTSVSDSMKPFNEAWAERG
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
WLTLADGVYDGAVAWSSDQLDLFTPELWGELGDTLSEGLSRGWDSLGEYASSIQNKIDHR
CEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIQARTNIINGIRAIKYDERGKAIESNWLETLQADSHVFAIGVTEMTKLYSGIAYDVVVE
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCEEEEEEC
PLVPDSIEIFFAEHSPLDIYNKAVNSAEELSVYVKYREEIFALIGHIRQRKVKEIQRFIE
CCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLDEIDPDLAQKLRNSSDFHLFIALLEEDDSVLLYLDYIMRIFEEIPPNFYTYCLGKAG
HHHHHCCHHHHHHHCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCH
IYIALEVLLVLLLGLISVGAGAAVKAAATSQKVAKYSNMFAKAVSHNKAVQNMRSGLNAV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFEQLLALFEKLKKIAIARSKALSTTFTGWTNRTVKKSVSTPKRDDKPPRCRVCGKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCCEEECCCCC
HDTKPVRAGRLNYA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKPAARISDFHVCPKKTGKVPHVGGPIVNGSPNVFIEGLPAAREGDSIVCVGPADSIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCC
GGSSSVFINGKPAARLGDSSSHGGVIISGAGTVLIGDAGIVVQPSPAPKSSSTSAKESTA
CCCCEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEECCCCCCCCCCCCHHHHHH
ESASSLATSQSHQPLLQSSLSDQFQQHEDITARTDGESFATEAEKEEFSWVKIRLEYDDL
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHH
WNTAIPFYSSVISTESSDGSQKLVHEVEASTKHTKGTTKRNSDHYEVQEAKQSEQFEPGV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH
HVIENIPLEQTKVLVDVLGKSGSASEIKQLTDELHKELDSIFTSVSDSMKPFNEAWAERG
HHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
WLTLADGVYDGAVAWSSDQLDLFTPELWGELGDTLSEGLSRGWDSLGEYASSIQNKIDHR
CEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIQARTNIINGIRAIKYDERGKAIESNWLETLQADSHVFAIGVTEMTKLYSGIAYDVVVE
HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCEEEEEEC
PLVPDSIEIFFAEHSPLDIYNKAVNSAEELSVYVKYREEIFALIGHIRQRKVKEIQRFIE
CCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STLDEIDPDLAQKLRNSSDFHLFIALLEEDDSVLLYLDYIMRIFEEIPPNFYTYCLGKAG
HHHHHCCHHHHHHHCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHCCH
IYIALEVLLVLLLGLISVGAGAAVKAAATSQKVAKYSNMFAKAVSHNKAVQNMRSGLNAV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFEQLLALFEKLKKIAIARSKALSTTFTGWTNRTVKKSVSTPKRDDKPPRCRVCGKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCCCCCEEECCCCC
HDTKPVRAGRLNYA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA