| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is mlaC [H]
Identifier: 326423750
GI number: 326423750
Start: 703817
End: 704452
Strand: Reverse
Name: mlaC [H]
Synonym: NA
Alternate gene names: 326423750
Gene position: 704452-703817 (Counterclockwise)
Preceding gene: 27364140
Following gene: 27364138
Centisome position: 21.46
GC content: 46.86
Gene sequence:
>636_bases ATGAAACGATTCTTTTTGACCTGTCTCTCGCTGTTGATGTCGCTTAATGTATTGGCGAGCACGGCAGTGGACAAAGCCGA GCCGTATCAAATGATGAAGCAGGTTTCAGAGCAGGCTTTTGCGCGTTTAAAGGCAGAGCAACCTAAAATTCAGCAAGATC CGGACTACCTCAAAGTGGTGGTAGAAGAAGAGCTGATGCCATACGTGAATGAAAAGTACGCGGCACTTAAGTTATTGGGT ACAAATCTAAAAGGGTCAAAGCGTGAAGACGTCACCGCGTTTATTGACGCGTTTCGCGCGTACTTAGTGAGCTCTTATGC GCAGGTATTGACGCAATACACGGATCAGAAAATTCTCTTTGGCCCGGAACCTAAGGTAGAAGACGGCCAGCGCATCACCA GTGTGAAAGTTGATATCATTGATACCCCCCGTCCAAACATTAAGCTAGAGTTCAAATTGCGTCGTGAGAATAACGGCGAT TGGCTGGCTTTTGATATGGTTGCCGAAGGGATCAGCTTACTCTCCAGCAAGCAGTCGGAGTGGAATGGTAAAATTCGCCA AGATGGTATTCTTGCCGTCGCCAACGAACTGGAAGCATTAGCGAAACAACCGATTCGTTTTGAGGCAAAAAACTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: ABC transporter auxiliary component YrbC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
NA
Sequences:
>Translated_211_residues MKRFFLTCLSLLMSLNVLASTAVDKAEPYQMMKQVSEQAFARLKAEQPKIQQDPDYLKVVVEEELMPYVNEKYAALKLLG TNLKGSKREDVTAFIDAFRAYLVSSYAQVLTQYTDQKILFGPEPKVEDGQRITSVKVDIIDTPRPNIKLEFKLRRENNGD WLAFDMVAEGISLLSSKQSEWNGKIRQDGILAVANELEALAKQPIRFEAKN >Mature_211_residues MKRFFLTCLSLLMSLNVLASTAVDKAEPYQMMKQVSEQAFARLKAEQPKIQQDPDYLKVVVEEELMPYVNEKYAALKLLG TNLKGSKREDVTAFIDAFRAYLVSSYAQVLTQYTDQKILFGPEPKVEDGQRITSVKVDIIDTPRPNIKLEFKLRRENNGD WLAFDMVAEGISLLSSKQSEWNGKIRQDGILAVANELEALAKQPIRFEAKN
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=211, Percent_Identity=37.914691943128, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23996; Mature: 23996
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFFLTCLSLLMSLNVLASTAVDKAEPYQMMKQVSEQAFARLKAEQPKIQQDPDYLKVV CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VEEELMPYVNEKYAALKLLGTNLKGSKREDVTAFIDAFRAYLVSSYAQVLTQYTDQKILF HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GPEPKVEDGQRITSVKVDIIDTPRPNIKLEFKLRRENNGDWLAFDMVAEGISLLSSKQSE CCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCHH WNGKIRQDGILAVANELEALAKQPIRFEAKN HCCCCCCCCHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure MKRFFLTCLSLLMSLNVLASTAVDKAEPYQMMKQVSEQAFARLKAEQPKIQQDPDYLKVV CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH VEEELMPYVNEKYAALKLLGTNLKGSKREDVTAFIDAFRAYLVSSYAQVLTQYTDQKILF HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GPEPKVEDGQRITSVKVDIIDTPRPNIKLEFKLRRENNGDWLAFDMVAEGISLLSSKQSE CCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCHH WNGKIRQDGILAVANELEALAKQPIRFEAKN HCCCCCCCCHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]