Click here to switch to the map view.

The map label for this gene is 32267361

Identifier: 32267361

GI number: 32267361

Start: 1783971

End: 1784531

Strand: Direct

Name: 32267361

Synonym: HH1862

Alternate gene names: NA

Gene position: 1783971-1784531 (Clockwise)

Preceding gene: 32267360

Following gene: 32267362

Centisome position: 99.16

GC content: 34.58

Gene sequence:

>561_bases
ATGGTAGGTTGTAGCACATCACCAAAATATATTAATACAGCAGATTCTAAATCTTATACAAGTATGGGACTTGATTATCA
CGACATTGAAAAAGCAGCAAGTAATAGTGTTCGTTCTTTACTCAATAGTAATTATGTGCGCAATCTTTCTCGCACAGGCT
CTCCTAAAGTATTAATGATATCAAATGTCATTAATGATACTATGCAAACTATTGATACAGAACAGCTTACTCGGAAAGTA
ACACGTGATATGCGTAATAGTGGAAAATTTGTTCTTACTCTCGCAGTAGGAAATAAAAAAGATAAAGGTATTACGATGGG
TAGGAGTGTGCGTGATAATGATGAATTTGACCAACACACTACAATTGAAAAAGGCACATTAAAAGCTCCAGAATTTTCTC
TATCAGGAAAAATTGTGCAAAAAAATACTAAAATTGGCTCAAAGCAGCGCACTGACTATTATTTCCTTCTCACACTTACC
AACATTAAAGATGGTCTTGTTGTTTGGGACGATGAGGTAAATATCATTAAGCTTGGCTCAAATTCATCTGTAAGCTGGTA
A

Upstream 100 bases:

>100_bases
TTGCGTGTCAAGGGTAATAACCCAACTTATAGAATCTTAAAGGGCGGTAACATTGATGAATAAAGCTTTTTTATATCTTA
TAACCATAGGTGCATTATTT

Downstream 100 bases:

>100_bases
ATAACTAAATTTTAGGAGGCATTTATGAAAACACATACAAAAGTTTTATTTGGAGGCATTATTACAGGGTTGCTTATTAT
AGGCTGCGCCAATAAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MVGCSTSPKYINTADSKSYTSMGLDYHDIEKAASNSVRSLLNSNYVRNLSRTGSPKVLMISNVINDTMQTIDTEQLTRKV
TRDMRNSGKFVLTLAVGNKKDKGITMGRSVRDNDEFDQHTTIEKGTLKAPEFSLSGKIVQKNTKIGSKQRTDYYFLLTLT
NIKDGLVVWDDEVNIIKLGSNSSVSW

Sequences:

>Translated_186_residues
MVGCSTSPKYINTADSKSYTSMGLDYHDIEKAASNSVRSLLNSNYVRNLSRTGSPKVLMISNVINDTMQTIDTEQLTRKV
TRDMRNSGKFVLTLAVGNKKDKGITMGRSVRDNDEFDQHTTIEKGTLKAPEFSLSGKIVQKNTKIGSKQRTDYYFLLTLT
NIKDGLVVWDDEVNIIKLGSNSSVSW
>Mature_186_residues
MVGCSTSPKYINTADSKSYTSMGLDYHDIEKAASNSVRSLLNSNYVRNLSRTGSPKVLMISNVINDTMQTIDTEQLTRKV
TRDMRNSGKFVLTLAVGNKKDKGITMGRSVRDNDEFDQHTTIEKGTLKAPEFSLSGKIVQKNTKIGSKQRTDYYFLLTLT
NIKDGLVVWDDEVNIIKLGSNSSVSW

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20755; Mature: 20755

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGCSTSPKYINTADSKSYTSMGLDYHDIEKAASNSVRSLLNSNYVRNLSRTGSPKVLMI
CCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
SNVINDTMQTIDTEQLTRKVTRDMRNSGKFVLTLAVGNKKDKGITMGRSVRDNDEFDQHT
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCC
TIEKGTLKAPEFSLSGKIVQKNTKIGSKQRTDYYFLLTLTNIKDGLVVWDDEVNIIKLGS
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEECC
NSSVSW
CCCCCC
>Mature Secondary Structure
MVGCSTSPKYINTADSKSYTSMGLDYHDIEKAASNSVRSLLNSNYVRNLSRTGSPKVLMI
CCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
SNVINDTMQTIDTEQLTRKVTRDMRNSGKFVLTLAVGNKKDKGITMGRSVRDNDEFDQHT
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCCC
TIEKGTLKAPEFSLSGKIVQKNTKIGSKQRTDYYFLLTLTNIKDGLVVWDDEVNIIKLGS
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEECC
NSSVSW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA