| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267352
Identifier: 32267352
GI number: 32267352
Start: 1775563
End: 1776204
Strand: Direct
Name: 32267352
Synonym: HH1853
Alternate gene names: NA
Gene position: 1775563-1776204 (Clockwise)
Preceding gene: 32267351
Following gene: 32267353
Centisome position: 98.69
GC content: 34.58
Gene sequence:
>642_bases ATGAAACAAGAAGATAATGTTTCAAAACTTACCCCACAGGAACTTGAAGAGTTAAGTAATTGGCTATGGAATAATTGCGA TGATTGCGGACTAATGCTTGAAGATATGACAGATTCTTTACGATATTGCGATGAAAATCCTGCAGATTTAGACCCTAGCG AACTTGAAGATTGGCTTTTGGAAACAAGACTATTTGCACTTGATGACAATTGCCCTGAGGGAATAAAAGATTTACCAAAA GCATTAGGTGCATTAAAGGGCTTAAAAGCCATTGTAGCACAGGAACAATCCATTCAAAGCATTCCTAAAGAAATATGTGA AATCAAGGGTTTAGAAGTTTTGGATTTATTTGATAATGAACTCACACAAATCCCACAAGAAATTGGCAAACTAGAATCTT TAAGAGAACTTTACTTAAGTGGAAATAACATTACATCTTTGCCAGAGAGTATAAAAAATCTACAATCTTTAGAAATTTTA TGTTTGAATGACAATCCCATAAAAGCTTTACCAGAGTGGCTAAGCGAGTGTAAGAATCTAAAATGTATCGAAGTAGATGA TGATGTGGAGATTCCCTCCTGTATTGATAGCACACTTATCAATGCCGATTATGAAGGCTATAGCAGCTATGATTATAGAT AA
Upstream 100 bases:
>100_bases TGTAACTTATTTTAAAATTTTACTAAAAACTCTAAAAATTATTATTCAAAAAAAAAAAAAATGCGTGATATAATAATAGT AAAAACAAAAAGGAGAAACA
Downstream 100 bases:
>100_bases TCCTCTGCTATAATGGTGTTAATTCATCATAACCAAACACGATAAGAGGCTTTAGGAGGGGAAGTGGCAAAAATTGATAA GAGTATAAGCAAAGAATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR
Sequences:
>Translated_213_residues MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR >Mature_213_residues MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLLETRLFALDDNCPEGIKDLPK ALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNELTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEIL CLNDNPIKALPEWLSECKNLKCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI41281398, Length=114, Percent_Identity=40.3508771929825, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI61742784, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI61742786, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI122937315, Length=169, Percent_Identity=31.9526627218935, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI153792305, Length=130, Percent_Identity=33.0769230769231, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI238908508, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI194394161, Length=135, Percent_Identity=31.1111111111111, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI110825984, Length=120, Percent_Identity=30.8333333333333, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI95113664, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI16904383, Length=96, Percent_Identity=37.5, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI21389431, Length=112, Percent_Identity=32.1428571428571, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI55770895, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=9e-11, Organism=Homo sapiens, GI8923909, Length=114, Percent_Identity=35.0877192982456, Blast_Score=64, Evalue=1e-10, Organism=Caenorhabditis elegans, GI71991531, Length=120, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71991525, Length=120, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71981160, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71981152, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472958, Length=123, Percent_Identity=34.1463414634146, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI116007092, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24650330, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24650334, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650332, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362651, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362655, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650336, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362657, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362653, Length=123, Percent_Identity=34.1463414634146, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI221379725, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221379722, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922294, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI18858105, Length=103, Percent_Identity=35.9223300970874, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24163; Mature: 24163
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLL CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ETRLFALDDNCPEGIKDLPKALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEILCLNDNPIKALPEWLSECKNL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCC KCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKQEDNVSKLTPQELEELSNWLWNNCDDCGLMLEDMTDSLRYCDENPADLDPSELEDWLL CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH ETRLFALDDNCPEGIKDLPKALGALKGLKAIVAQEQSIQSIPKEICEIKGLEVLDLFDNE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LTQIPQEIGKLESLRELYLSGNNITSLPESIKNLQSLEILCLNDNPIKALPEWLSECKNL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCC KCIEVDDDVEIPSCIDSTLINADYEGYSSYDYR EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA