| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is purL
Identifier: 32267324
GI number: 32267324
Start: 1745942
End: 1748179
Strand: Direct
Name: purL
Synonym: HH1825
Alternate gene names: 32267324
Gene position: 1745942-1748179 (Clockwise)
Preceding gene: 32267322
Following gene: 32267325
Centisome position: 97.04
GC content: 39.54
Gene sequence:
>2238_bases ATGACAAATATTACACATCTTTTGGGTGAGATTAAAGACATTGATGAGACTCTAAAGGTTCATAAGCTTTCAAAGCAGGA TTATGAGGAGATTCTTAAGATTTTAAAGCGTCCTCCAAACCTTATAGAATTAGGGATTTTTGCGGCAATGTGGAGTGAAC ATTGTAGTTACAAATCAAGCAAAAAATATCTTAATGGATTCCCTACCAAAGCTCCTTGGGTTGTACAAGGACCAGGTGAA AATGCGGGCATAATTGATATTGGGGAAAATCTTTGTGCGGTCTTTAAGATAGAATCTCATAATCACCCAAGTTTCATTGA GCCTCACGCAGGGGCTGCTACTGGCGTAGGTGGGATTATGCGAGATATTTTTACAATGGGAGCACGTCCTGTGGCAAGCC TTAATTCTATTCGTTTTGGCGATATAAGCGATAATGGCACACTTGGCAAAAAACATCGTTACTTATTACGAGGCGTGGTA GAAGGCATAGGGAGTTATGGAAATTGTATGGGAGTGCCTACAATTGGCGGAGAAATGAGTTTTGAATCTTGCTATAATGG CAATATCTTAGTAAATGCATTTTGTTTAGGATTAGTCAAAAAAGATGAGATTTTTTATGGAAAAGCTGAAGGGATAGGGA ATCCTGTTATTTATGTAGGGAGTAAGACAGGACGTGATGGGTTAGGTGGAGCAGTGATGAGCAGTGATAGTTTCAGCTCT ACTTCAAAGGCTGTGCGTTCCGCGGTGCAAGTAGGCGACCCGTTTGCAGAAAAACTTTTGCTTGAAGCGTGTTTAGAGCT TTTCAAGCAAGATTTAATTGTTGGGATTCAAGATATGGGTGCAGCTGGGCTCACAAGCTCAAGTTTTGAAATGGCAGGTC GTAGTGGCAGCGGTATGACACTGTATCTTGATAAAGTGCCTATGCGCGAAGAAGGAATGAATCCTTATGAATTAATGCTA AGTGAATCTCAAGAGAGAATGCTTATTTGCGCTAAAAAAGGTTGTGAGCAACAGGTATTAGATATTTTTGCCAAATGGGA AGTAGATGCAGCAATTATTGGAGAAGTTACAAAAAGTGGCATTATGGAACTTTTTTGGTATGGAGAGAAATGTGCGGAGA TTCCAATCGCGCAATTAAGTGAAAATGCTCCTATGCTTGATATGCCCTTACGCCCTGTTGCAGTGCAAACTCATAAAGCT AATCAACTTAAAACATCTCAAAGCGCACAAGAAATTTTTATAACTCTGCTTGGAAGTGTAGAGGTTGCAAATAAAAGATG GGTTTATAGCCAATATGATAGTAGTGTGCAAAGCAATACGATTACTCCTGCAGGAAGCGGTGATGCGAGTATGATACGTA TAAAAGGCACAAATAGTGCATTGAGTATGAGCGTGGATTGCAATATGCGCTATTGTTACCTTGACCCCAAAAATGGCGCA AAGATTGCGGTAGCAACTTCAGGACGTAACTCCATAGTCAATGGTGCAAAGCCTTTGGCAATTAGTGATTGTCTGAATTT TGGCTCACCTCATAATCCTGAAGTGATGTGGGCGTTCAAGGAAGTATGTCAAGGCATTAAAGAATCTTGTAAAGTATTAA ATACTCCAGTAGTAAGCGGTAATGTTTCTTTGCATAATCAAAGCGATGGCGTGGATATTTACCCTACACCCTCTATTGTA AGTGTGGGTTTGATAGATGATGTAAGTAAGGTAGTGTCTTCAACATTCCAAACACAGGGGAATATGCTCGTATTACTTGG CGAAATTAAAGCCGAGTTTGGTGGCTCTTTGGCACAAAAGATTTTGGAAGGACATATTTATGGGCAAATTCCAAGCATTG ATTTAACACAAGAGTTTGCTTTATGGAATTTAATGCTTGAGGCGAGTGATGAATGTATGTTGAGTGCTGCAAAAGATATT GGTGAGGGGGGATTAGCTATTACTCTTGCAAAAATGGCATTAGGCAATGGCGAATGCCAACCCATAGGTTGTAATGTCCA TACGCATTTACCCTCACAGCTACTTTTTGCACCTTCCCAAAGCTGTATCATTGTAGAAGTAGCAGGAGAGCATCTCAATA CGCTAAAGCAAAAAGCAAAACAACATAAGATTGCTTTTACAGAAATTGGTTGTGTAGGAGGTGATATTTTTTGTGTTGAT GAGATTAATATAAGCCTTGAAGAGATGAAAAAGCTTTATTTTGAGAGTTTTGAAAAGTTAATTGCTCAAGATTTGTGA
Upstream 100 bases:
>100_bases CCAAACTTAAAAAGTGTAACTCTTAAACAAAAGCGAAAAAAAGCATAAGTTGTGATAGAATCTACACTTTTTATTTATTT TTGCAATGATTGAGGTGGCA
Downstream 100 bases:
>100_bases TTTTAAGGGGAATTGAGTAAAGTAAAAATGCAAACTTTTGTTTTAAAAACTGCATTCATTTATACATTTATATGCTTTGC TCTTGATATAGCCATTGCGG
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MTNITHLLGEIKDIDETLKVHKLSKQDYEEILKILKRPPNLIELGIFAAMWSEHCSYKSSKKYLNGFPTKAPWVVQGPGE NAGIIDIGENLCAVFKIESHNHPSFIEPHAGAATGVGGIMRDIFTMGARPVASLNSIRFGDISDNGTLGKKHRYLLRGVV EGIGSYGNCMGVPTIGGEMSFESCYNGNILVNAFCLGLVKKDEIFYGKAEGIGNPVIYVGSKTGRDGLGGAVMSSDSFSS TSKAVRSAVQVGDPFAEKLLLEACLELFKQDLIVGIQDMGAAGLTSSSFEMAGRSGSGMTLYLDKVPMREEGMNPYELML SESQERMLICAKKGCEQQVLDIFAKWEVDAAIIGEVTKSGIMELFWYGEKCAEIPIAQLSENAPMLDMPLRPVAVQTHKA NQLKTSQSAQEIFITLLGSVEVANKRWVYSQYDSSVQSNTITPAGSGDASMIRIKGTNSALSMSVDCNMRYCYLDPKNGA KIAVATSGRNSIVNGAKPLAISDCLNFGSPHNPEVMWAFKEVCQGIKESCKVLNTPVVSGNVSLHNQSDGVDIYPTPSIV SVGLIDDVSKVVSSTFQTQGNMLVLLGEIKAEFGGSLAQKILEGHIYGQIPSIDLTQEFALWNLMLEASDECMLSAAKDI GEGGLAITLAKMALGNGECQPIGCNVHTHLPSQLLFAPSQSCIIVEVAGEHLNTLKQKAKQHKIAFTEIGCVGGDIFCVD EINISLEEMKKLYFESFEKLIAQDL
Sequences:
>Translated_745_residues MTNITHLLGEIKDIDETLKVHKLSKQDYEEILKILKRPPNLIELGIFAAMWSEHCSYKSSKKYLNGFPTKAPWVVQGPGE NAGIIDIGENLCAVFKIESHNHPSFIEPHAGAATGVGGIMRDIFTMGARPVASLNSIRFGDISDNGTLGKKHRYLLRGVV EGIGSYGNCMGVPTIGGEMSFESCYNGNILVNAFCLGLVKKDEIFYGKAEGIGNPVIYVGSKTGRDGLGGAVMSSDSFSS TSKAVRSAVQVGDPFAEKLLLEACLELFKQDLIVGIQDMGAAGLTSSSFEMAGRSGSGMTLYLDKVPMREEGMNPYELML SESQERMLICAKKGCEQQVLDIFAKWEVDAAIIGEVTKSGIMELFWYGEKCAEIPIAQLSENAPMLDMPLRPVAVQTHKA NQLKTSQSAQEIFITLLGSVEVANKRWVYSQYDSSVQSNTITPAGSGDASMIRIKGTNSALSMSVDCNMRYCYLDPKNGA KIAVATSGRNSIVNGAKPLAISDCLNFGSPHNPEVMWAFKEVCQGIKESCKVLNTPVVSGNVSLHNQSDGVDIYPTPSIV SVGLIDDVSKVVSSTFQTQGNMLVLLGEIKAEFGGSLAQKILEGHIYGQIPSIDLTQEFALWNLMLEASDECMLSAAKDI GEGGLAITLAKMALGNGECQPIGCNVHTHLPSQLLFAPSQSCIIVEVAGEHLNTLKQKAKQHKIAFTEIGCVGGDIFCVD EINISLEEMKKLYFESFEKLIAQDL >Mature_744_residues TNITHLLGEIKDIDETLKVHKLSKQDYEEILKILKRPPNLIELGIFAAMWSEHCSYKSSKKYLNGFPTKAPWVVQGPGEN AGIIDIGENLCAVFKIESHNHPSFIEPHAGAATGVGGIMRDIFTMGARPVASLNSIRFGDISDNGTLGKKHRYLLRGVVE GIGSYGNCMGVPTIGGEMSFESCYNGNILVNAFCLGLVKKDEIFYGKAEGIGNPVIYVGSKTGRDGLGGAVMSSDSFSST SKAVRSAVQVGDPFAEKLLLEACLELFKQDLIVGIQDMGAAGLTSSSFEMAGRSGSGMTLYLDKVPMREEGMNPYELMLS ESQERMLICAKKGCEQQVLDIFAKWEVDAAIIGEVTKSGIMELFWYGEKCAEIPIAQLSENAPMLDMPLRPVAVQTHKAN QLKTSQSAQEIFITLLGSVEVANKRWVYSQYDSSVQSNTITPAGSGDASMIRIKGTNSALSMSVDCNMRYCYLDPKNGAK IAVATSGRNSIVNGAKPLAISDCLNFGSPHNPEVMWAFKEVCQGIKESCKVLNTPVVSGNVSLHNQSDGVDIYPTPSIVS VGLIDDVSKVVSSTFQTQGNMLVLLGEIKAEFGGSLAQKILEGHIYGQIPSIDLTQEFALWNLMLEASDECMLSAAKDIG EGGLAITLAKMALGNGECQPIGCNVHTHLPSQLLFAPSQSCIIVEVAGEHLNTLKQKAKQHKIAFTEIGCVGGDIFCVDE INISLEEMKKLYFESFEKLIAQDL
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=652, Percent_Identity=22.8527607361963, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI48994899, Length=734, Percent_Identity=25.3405994550409, Blast_Score=107, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17553022, Length=684, Percent_Identity=22.6608187134503, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_HELHP (Q7VF52)
Other databases:
- EMBL: AE017125 - RefSeq: NP_861356.1 - ProteinModelPortal: Q7VF52 - SMR: Q7VF52 - GeneID: 1492372 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1825 - NMPDR: fig|235279.1.peg.1825 - HOGENOM: HBG311214 - OMA: YGNSFGV - ProtClustDB: PRK01213 - BioCyc: HHEP235279:HH_1825-MONOMER - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 80516; Mature: 80384
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNITHLLGEIKDIDETLKVHKLSKQDYEEILKILKRPPNLIELGIFAAMWSEHCSYKSS CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH KKYLNGFPTKAPWVVQGPGENAGIIDIGENLCAVFKIESHNHPSFIEPHAGAATGVGGIM HHHHCCCCCCCCEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHH RDIFTMGARPVASLNSIRFGDISDNGTLGKKHRYLLRGVVEGIGSYGNCMGVPTIGGEMS HHHHHCCCCCCHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC FESCYNGNILVNAFCLGLVKKDEIFYGKAEGIGNPVIYVGSKTGRDGLGGAVMSSDSFSS HHHHCCCCEEEEEHHHHHEECCCEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCCCH TSKAVRSAVQVGDPFAEKLLLEACLELFKQDLIVGIQDMGAAGLTSSSFEMAGRSGSGMT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCHHHCCCCCCCCE LYLDKVPMREEGMNPYELMLSESQERMLICAKKGCEQQVLDIFAKWEVDAAIIGEVTKSG EEEECCCCHHCCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH IMELFWYGEKCAEIPIAQLSENAPMLDMPLRPVAVQTHKANQLKTSQSAQEIFITLLGSV HHHHHHCCCHHHCCCHHHHCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCE EVANKRWVYSQYDSSVQSNTITPAGSGDASMIRIKGTNSALSMSVDCNMRYCYLDPKNGA EECCCCEEHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCCCC KIAVATSGRNSIVNGAKPLAISDCLNFGSPHNPEVMWAFKEVCQGIKESCKVLNTPVVSG EEEEEECCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC NVSLHNQSDGVDIYPTPSIVSVGLIDDVSKVVSSTFQTQGNMLVLLGEIKAEFGGSLAQK CEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHH ILEGHIYGQIPSIDLTQEFALWNLMLEASDECMLSAAKDIGEGGLAITLAKMALGNGECQ HHHCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCCCC PIGCNVHTHLPSQLLFAPSQSCIIVEVAGEHLNTLKQKAKQHKIAFTEIGCVGGDIFCVD EECCCEECCCCCHHEECCCCCEEEEEECCHHHHHHHHHHHHHCEEEEEECCCCCCEEEEE EINISLEEMKKLYFESFEKLIAQDL ECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNITHLLGEIKDIDETLKVHKLSKQDYEEILKILKRPPNLIELGIFAAMWSEHCSYKSS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH KKYLNGFPTKAPWVVQGPGENAGIIDIGENLCAVFKIESHNHPSFIEPHAGAATGVGGIM HHHHCCCCCCCCEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHH RDIFTMGARPVASLNSIRFGDISDNGTLGKKHRYLLRGVVEGIGSYGNCMGVPTIGGEMS HHHHHCCCCCCHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC FESCYNGNILVNAFCLGLVKKDEIFYGKAEGIGNPVIYVGSKTGRDGLGGAVMSSDSFSS HHHHCCCCEEEEEHHHHHEECCCEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCCCH TSKAVRSAVQVGDPFAEKLLLEACLELFKQDLIVGIQDMGAAGLTSSSFEMAGRSGSGMT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCHHHCCCCCCCCE LYLDKVPMREEGMNPYELMLSESQERMLICAKKGCEQQVLDIFAKWEVDAAIIGEVTKSG EEEECCCCHHCCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH IMELFWYGEKCAEIPIAQLSENAPMLDMPLRPVAVQTHKANQLKTSQSAQEIFITLLGSV HHHHHHCCCHHHCCCHHHHCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCE EVANKRWVYSQYDSSVQSNTITPAGSGDASMIRIKGTNSALSMSVDCNMRYCYLDPKNGA EECCCCEEHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCEEEEEEECCCCC KIAVATSGRNSIVNGAKPLAISDCLNFGSPHNPEVMWAFKEVCQGIKESCKVLNTPVVSG EEEEEECCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEC NVSLHNQSDGVDIYPTPSIVSVGLIDDVSKVVSSTFQTQGNMLVLLGEIKAEFGGSLAQK CEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHH ILEGHIYGQIPSIDLTQEFALWNLMLEASDECMLSAAKDIGEGGLAITLAKMALGNGECQ HHHCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCCCC PIGCNVHTHLPSQLLFAPSQSCIIVEVAGEHLNTLKQKAKQHKIAFTEIGCVGGDIFCVD EECCCEECCCCCHHEECCCCCEEEEEECCHHHHHHHHHHHHHCEEEEEECCCCCCEEEEE EINISLEEMKKLYFESFEKLIAQDL ECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12810954