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The map label for this gene is oppB

Identifier: 32267283

GI number: 32267283

Start: 1706321

End: 1707373

Strand: Direct

Name: oppB

Synonym: HH1784

Alternate gene names: 32267283

Gene position: 1706321-1707373 (Clockwise)

Preceding gene: 32267282

Following gene: 32267284

Centisome position: 94.84

GC content: 35.99

Gene sequence:

>1053_bases
ATGTTAGGCTATATTTTCAAACGGCTTTTACTTGTTATCCCCACTCTTATAGGTGTGATGAGTATTAATTTTTTGCTTAT
GCAGCTTGCCCCTGGTGGTCCTGTGGAGCAGACAATAGCTAAAATAGAGAATCTTGGGCATTTAAGTGAGGCAGCAGTAG
GGCAAAATACTCTTTATAAAGGTTCTATTGGCTTAGAGCCTGAACTTATAGAAGAGATAAAAAAACTCTATGGCTTTGAT
AAGTCTCTAAGCGAACGATATTTTCAAATGCTTTTTCATTTTGCCTGTTTTGATTTTGGTGAGAGTTTTTATAGCCAATC
AAGTGTGCTTTCAATCATCGCACAAAAATTGCCTGTGTCTATTTCGCTAGGGATATTTAGCACACTTATTATTTATCTTA
TTAGCATTCCGCTAGGTATTGCAAAAGCAGTGCGTAATGGTTCGCATTTTGATGTGATAAGTAGCGTCATTATTGTTGTG
CTTAATGCGATTCCGGCTTTTATGTTTGGTGTGGTGCTTATCGTGCTTTTTTGTGGAGGGAGTTATTTTGATATTTTTCC
TTTACGAGGGCTAGTGAGCGAGCATTTTGAATCTTTAAATATGTGGGGCAAGATTAAAGATTATTTATGGCATTTATTTT
TGCCTGTGCTGTGTATTTCCATAGGTGGTTTTGCAACTTTAAGTATGTTAAGCAAAAATTGCTTTTTGGAGGAGATTCGC
AAAAGCTATGTGATAAGTGCTAAAGCAAAGGGTGGGAGCGAATCTTATATACTTTATAAGCATATTTTTCGCAATGCAAT
GCTTTTAATCGTAAGCGGATTTCCTGCTGTGTTTGTGGGTGCATTTTTTAGCGGAAGTTTGCTTATTGAAATTATTTTTA
GCCTTGATGGTTTGGGACTTTTGGGATATGAAAGTGTGATTAACCGCGATTATCCTGTTATTTTTGGCACTTTATATATT
TTTACTTTTATTGCCCTTGTGATAGGTATTATAAGTGATGTGATGTATTATCTCATTGACCCACGTATCCATTTTGGGAG
CAAAAATGTCTAA

Upstream 100 bases:

>100_bases
GCAGGAAGTGCAAAATGCTGATAAACAATATCTCGCAAGGTTTGCGACAACAAATTTTCAAGCATTTTATTCTTACACAG
ATTTTTTACAAGAGCGTCCG

Downstream 100 bases:

>100_bases
TAGTATGCTCAAAACTCGTTGGTATGTCTTTAAGCAAAATAAACGCGCTTTTTATTCCCTTATATGTTTTGCACTCCTTT
TTTTAATAAGCGTATTTGCA

Product: oligopeptide ABC transporter

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLGYIFKRLLLVIPTLIGVMSINFLLMQLAPGGPVEQTIAKIENLGHLSEAAVGQNTLYKGSIGLEPELIEEIKKLYGFD
KSLSERYFQMLFHFACFDFGESFYSQSSVLSIIAQKLPVSISLGIFSTLIIYLISIPLGIAKAVRNGSHFDVISSVIIVV
LNAIPAFMFGVVLIVLFCGGSYFDIFPLRGLVSEHFESLNMWGKIKDYLWHLFLPVLCISIGGFATLSMLSKNCFLEEIR
KSYVISAKAKGGSESYILYKHIFRNAMLLIVSGFPAVFVGAFFSGSLLIEIIFSLDGLGLLGYESVINRDYPVIFGTLYI
FTFIALVIGIISDVMYYLIDPRIHFGSKNV

Sequences:

>Translated_350_residues
MLGYIFKRLLLVIPTLIGVMSINFLLMQLAPGGPVEQTIAKIENLGHLSEAAVGQNTLYKGSIGLEPELIEEIKKLYGFD
KSLSERYFQMLFHFACFDFGESFYSQSSVLSIIAQKLPVSISLGIFSTLIIYLISIPLGIAKAVRNGSHFDVISSVIIVV
LNAIPAFMFGVVLIVLFCGGSYFDIFPLRGLVSEHFESLNMWGKIKDYLWHLFLPVLCISIGGFATLSMLSKNCFLEEIR
KSYVISAKAKGGSESYILYKHIFRNAMLLIVSGFPAVFVGAFFSGSLLIEIIFSLDGLGLLGYESVINRDYPVIFGTLYI
FTFIALVIGIISDVMYYLIDPRIHFGSKNV
>Mature_350_residues
MLGYIFKRLLLVIPTLIGVMSINFLLMQLAPGGPVEQTIAKIENLGHLSEAAVGQNTLYKGSIGLEPELIEEIKKLYGFD
KSLSERYFQMLFHFACFDFGESFYSQSSVLSIIAQKLPVSISLGIFSTLIIYLISIPLGIAKAVRNGSHFDVISSVIIVV
LNAIPAFMFGVVLIVLFCGGSYFDIFPLRGLVSEHFESLNMWGKIKDYLWHLFLPVLCISIGGFATLSMLSKNCFLEEIR
KSYVISAKAKGGSESYILYKHIFRNAMLLIVSGFPAVFVGAFFSGSLLIEIIFSLDGLGLLGYESVINRDYPVIFGTLYI
FTFIALVIGIISDVMYYLIDPRIHFGSKNV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=58.5164835164835, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1789965, Length=360, Percent_Identity=26.3888888888889, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787497, Length=348, Percent_Identity=26.1494252873563, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787053, Length=345, Percent_Identity=28.9855072463768, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1789888, Length=344, Percent_Identity=26.453488372093, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787761, Length=357, Percent_Identity=25.2100840336134, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787550, Length=280, Percent_Identity=21.7857142857143, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38869; Mature: 38869

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYIFKRLLLVIPTLIGVMSINFLLMQLAPGGPVEQTIAKIENLGHLSEAAVGQNTLYK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEC
GSIGLEPELIEEIKKLYGFDKSLSERYFQMLFHFACFDFGESFYSQSSVLSIIAQKLPVS
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ISLGIFSTLIIYLISIPLGIAKAVRNGSHFDVISSVIIVVLNAIPAFMFGVVLIVLFCGG
EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYFDIFPLRGLVSEHFESLNMWGKIKDYLWHLFLPVLCISIGGFATLSMLSKNCFLEEIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSYVISAKAKGGSESYILYKHIFRNAMLLIVSGFPAVFVGAFFSGSLLIEIIFSLDGLGL
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LGYESVINRDYPVIFGTLYIFTFIALVIGIISDVMYYLIDPRIHFGSKNV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLGYIFKRLLLVIPTLIGVMSINFLLMQLAPGGPVEQTIAKIENLGHLSEAAVGQNTLYK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCEEC
GSIGLEPELIEEIKKLYGFDKSLSERYFQMLFHFACFDFGESFYSQSSVLSIIAQKLPVS
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ISLGIFSTLIIYLISIPLGIAKAVRNGSHFDVISSVIIVVLNAIPAFMFGVVLIVLFCGG
EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYFDIFPLRGLVSEHFESLNMWGKIKDYLWHLFLPVLCISIGGFATLSMLSKNCFLEEIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSYVISAKAKGGSESYILYKHIFRNAMLLIVSGFPAVFVGAFFSGSLLIEIIFSLDGLGL
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
LGYESVINRDYPVIFGTLYIFTFIALVIGIISDVMYYLIDPRIHFGSKNV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]