| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267228
Identifier: 32267228
GI number: 32267228
Start: 1654478
End: 1654918
Strand: Direct
Name: 32267228
Synonym: HH1729
Alternate gene names: NA
Gene position: 1654478-1654918 (Clockwise)
Preceding gene: 32267226
Following gene: 32267231
Centisome position: 91.96
GC content: 34.47
Gene sequence:
>441_bases TTGAGCTTTGAGACTATCGTTGGGTATAAATCATTTCTTACTCCTGCTTTTGGTATGCGTTATTATATAAACTTTGCTTA TTCAAATGCAGAACAAAAGAATGACTTAAAACCAAAAATTATAATGAATTATGGACTAAATGCAGATATGCTTTATAATG TAGTGGCGAGTGAAAGTGTGAATCTAGGTGCATTTGTGGGTGTAGGCGTTGGTGCAAATACTTGGGCTGCAAAAAATAAT GAAGATTTTAAGGCAAAAACAGGTTTTAATGTCGCACTTAATGCTGGTTTAAGAAGTCAATTTGGCAAACATCACGGCAT AGAAGTTGTAGCTCGTGTGCCTTTTATAGATACGACATTAGAAAATGATAGAATAACAGGCGCTAAACAAACAGGCTCAC ATATTTATAATGTTGGTGCGCGTTATATTTTAAGCTTCTAA
Upstream 100 bases:
>100_bases TAATGGAATAGCAGAAGAAAGTGGATTATTCATTGGTGTTGGCACAGGTTATGGGCAAAGCGAAATCAAATCTAATAACA CGAAAACAAAGCTTGATGGC
Downstream 100 bases:
>100_bases GAGTTGCTTAGATTCTTTAATGGGGGCAAATGCCTCCACCCTTTTAATAGAGTTATACTTCTGTGGTGCTGATACCATAT TTTTCTTCAAGCTTTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSFETIVGYKSFLTPAFGMRYYINFAYSNAEQKNDLKPKIIMNYGLNADMLYNVVASESVNLGAFVGVGVGANTWAAKNN EDFKAKTGFNVALNAGLRSQFGKHHGIEVVARVPFIDTTLENDRITGAKQTGSHIYNVGARYILSF
Sequences:
>Translated_146_residues MSFETIVGYKSFLTPAFGMRYYINFAYSNAEQKNDLKPKIIMNYGLNADMLYNVVASESVNLGAFVGVGVGANTWAAKNN EDFKAKTGFNVALNAGLRSQFGKHHGIEVVARVPFIDTTLENDRITGAKQTGSHIYNVGARYILSF >Mature_145_residues SFETIVGYKSFLTPAFGMRYYINFAYSNAEQKNDLKPKIIMNYGLNADMLYNVVASESVNLGAFVGVGVGANTWAAKNNE DFKAKTGFNVALNAGLRSQFGKHHGIEVVARVPFIDTTLENDRITGAKQTGSHIYNVGARYILSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16072; Mature: 15941
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFETIVGYKSFLTPAFGMRYYINFAYSNAEQKNDLKPKIIMNYGLNADMLYNVVASESV CCCCHHCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCC NLGAFVGVGVGANTWAAKNNEDFKAKTGFNVALNAGLRSQFGKHHGIEVVARVPFIDTTL CCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEECCHHHHCCCCCCEEEEEECCEEECCC ENDRITGAKQTGSHIYNVGARYILSF CCCCCCCCCCCCCHHHHCCCEEEECC >Mature Secondary Structure SFETIVGYKSFLTPAFGMRYYINFAYSNAEQKNDLKPKIIMNYGLNADMLYNVVASESV CCCHHCCHHHHHCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCC NLGAFVGVGVGANTWAAKNNEDFKAKTGFNVALNAGLRSQFGKHHGIEVVARVPFIDTTL CCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEECCHHHHCCCCCCEEEEEECCEEECCC ENDRITGAKQTGSHIYNVGARYILSF CCCCCCCCCCCCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA