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The map label for this gene is yxkH [H]

Identifier: 32267195

GI number: 32267195

Start: 1624473

End: 1625231

Strand: Direct

Name: yxkH [H]

Synonym: HH1696

Alternate gene names: 32267195

Gene position: 1624473-1625231 (Clockwise)

Preceding gene: 32267194

Following gene: 32267196

Centisome position: 90.29

GC content: 35.44

Gene sequence:

>759_bases
ATGATATGTATTCCTATACTCCGATATACTCATATTCGTGATATGCAAGATTCTCATAGCGTATCTTTGGGGACTTTTGA
AAAACAAATTCAGTATTTGCATAAAAAGTCTTTTAGTTTTTTAAGCCTTGATGATATTATTGCTTTTAAAAAAGATAATA
GCCTTATTCCGCGCAGATGTGTGTTACTAAGCTTTGATGGAGCGTGGCGTGATGTGTATCAAAACGCTTATGAGATTATG
AAGCATTATTGGGTAAAAGCTGGACTATTTGTGGTAACAGAATGGGTTGATGAGGCTTCAAAGCTAACAAGTGAATATGT
TTCTTTGCCTCACGAACAATGTAAAAATGCCATATTAAACAACGCACGCAGTGTGATGTGTAATTGGGAAGAAATCCGCA
CAATGCAAGATGTCTTTAGCATAGGGTCAATGACGCACACTTATCAATTTTCAAATATTATTTCACTTTCGTGGCACGAG
GATTTTGAATTATCAAAGAGATTGATTCAAGAGCAACTTGGTGTGCAGACAAAGCATCTTGCGTGGCCTGATGGGAATTA
TAATCAAGGATTACTTCGCACAGCAAAGAGTATGGGCTATGAGGCATTTTATACAATGGAGGAAGGCTTAAACCAAGCTA
CAGAAAATAATGATGCACTTAAACGTTATAGCGCCAAAGATAGTCTTTTTTGGTTAAAAAGGGTGTTATTTGCCACTTCA
AATACAAGAAATTTTAGAATTGGCAAAATATTTTTATAA

Upstream 100 bases:

>100_bases
TTGCTCAAACTTATAATCATTTTTCCAATCTTACTACAAATTATAATGCAGTGCTCGCTTCAACAAGCAGAATTAATCAA
ATGTCGTTGGTAAATTATCT

Downstream 100 bases:

>100_bases
TCTGTGCTATAATTCAAGCTAAATTTAAGTATTGAGAGGAAGAGAAAATGAGAATCTTAGTCATAGAAGATGATCCTACC
TTATGTAAAAATATTGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MICIPILRYTHIRDMQDSHSVSLGTFEKQIQYLHKKSFSFLSLDDIIAFKKDNSLIPRRCVLLSFDGAWRDVYQNAYEIM
KHYWVKAGLFVVTEWVDEASKLTSEYVSLPHEQCKNAILNNARSVMCNWEEIRTMQDVFSIGSMTHTYQFSNIISLSWHE
DFELSKRLIQEQLGVQTKHLAWPDGNYNQGLLRTAKSMGYEAFYTMEEGLNQATENNDALKRYSAKDSLFWLKRVLFATS
NTRNFRIGKIFL

Sequences:

>Translated_252_residues
MICIPILRYTHIRDMQDSHSVSLGTFEKQIQYLHKKSFSFLSLDDIIAFKKDNSLIPRRCVLLSFDGAWRDVYQNAYEIM
KHYWVKAGLFVVTEWVDEASKLTSEYVSLPHEQCKNAILNNARSVMCNWEEIRTMQDVFSIGSMTHTYQFSNIISLSWHE
DFELSKRLIQEQLGVQTKHLAWPDGNYNQGLLRTAKSMGYEAFYTMEEGLNQATENNDALKRYSAKDSLFWLKRVLFATS
NTRNFRIGKIFL
>Mature_252_residues
MICIPILRYTHIRDMQDSHSVSLGTFEKQIQYLHKKSFSFLSLDDIIAFKKDNSLIPRRCVLLSFDGAWRDVYQNAYEIM
KHYWVKAGLFVVTEWVDEASKLTSEYVSLPHEQCKNAILNNARSVMCNWEEIRTMQDVFSIGSMTHTYQFSNIISLSWHE
DFELSKRLIQEQLGVQTKHLAWPDGNYNQGLLRTAKSMGYEAFYTMEEGLNQATENNDALKRYSAKDSLFWLKRVLFATS
NTRNFRIGKIFL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 29512; Mature: 29512

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICIPILRYTHIRDMQDSHSVSLGTFEKQIQYLHKKSFSFLSLDDIIAFKKDNSLIPRRC
CEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHEECCCCCCCCCEE
VLLSFDGAWRDVYQNAYEIMKHYWVKAGLFVVTEWVDEASKLTSEYVSLPHEQCKNAILN
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NARSVMCNWEEIRTMQDVFSIGSMTHTYQFSNIISLSWHEDFELSKRLIQEQLGVQTKHL
CHHHEEECHHHHHHHHHHHHHCCHHHEEECCCEEEECCCCCHHHHHHHHHHHHCCCEEEE
AWPDGNYNQGLLRTAKSMGYEAFYTMEEGLNQATENNDALKRYSAKDSLFWLKRVLFATS
ECCCCCCCHHHHHHHHHCCCHHEEEHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCC
NTRNFRIGKIFL
CCCCEEEEEEEC
>Mature Secondary Structure
MICIPILRYTHIRDMQDSHSVSLGTFEKQIQYLHKKSFSFLSLDDIIAFKKDNSLIPRRC
CEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHEECCCCCCCCCEE
VLLSFDGAWRDVYQNAYEIMKHYWVKAGLFVVTEWVDEASKLTSEYVSLPHEQCKNAILN
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
NARSVMCNWEEIRTMQDVFSIGSMTHTYQFSNIISLSWHEDFELSKRLIQEQLGVQTKHL
CHHHEEECHHHHHHHHHHHHHCCHHHEEECCCEEEECCCCCHHHHHHHHHHHHCCCEEEE
AWPDGNYNQGLLRTAKSMGYEAFYTMEEGLNQATENNDALKRYSAKDSLFWLKRVLFATS
ECCCCCCCHHHHHHHHHCCCHHEEEHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCC
NTRNFRIGKIFL
CCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]