| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is flgL
Identifier: 32267194
GI number: 32267194
Start: 1621909
End: 1624476
Strand: Direct
Name: flgL
Synonym: HH1695
Alternate gene names: 32267194
Gene position: 1621909-1624476 (Clockwise)
Preceding gene: 32267193
Following gene: 32267195
Centisome position: 90.15
GC content: 34.93
Gene sequence:
>2568_bases ATGAGGGTTACATTTGGCACAAAATATAACCAAATGAATTATTATCAAGGCACGATGCAAAGTAAGCTTATGGATATGAA TACTAAAATTGCTTCTGGCTTAAAGATTCAATATGGCTACCAAGATAGTAGTGTATTTAACCAGAATCTAAAACTTGAAT ATGAAAAAATCAATCTTGACCAAGGTATTGATGTGGGAAATGATGCTTATACTTCTACGCTTAATACCGATAAAGCACTT TCAGAACTTTCTCAAACTGCCGAGCAATTCAATACGAAACTTATTCAAGCTGCAAATGATATACACTCCCCAACTTCTCG CGAAGCCATTGCTAGAGATTTAGAAAAGCTCAAAGAGCATATGATTAATATTGCTAATACTTCTATTGGTGGTGAATTTC TTTTTGCTGGAAGTAATGTGAAGATTCGTCCTTTTGACCCTGATGGCACATATAAAGGTAATAATGAAACACTAGAGGCA TTGGTAAGCAATAATAATCCCATACCTTATAATATTACAGGAGAAGAGTTATTTTTTGGGCGAGATTCTGACCATCATAA AAGTATCACAACTAATATTCGCAAATTTAACCAAACTAAGCTTAATAACGACATTATGGATAGAATCAAACGTGGTGATA TTCCAGAAGAAGTGTATATTAAAGTTGGAGATACCTTACGGGATTTGCTTGGAGACAATGACGATGATACGAGCAACAAT GGCAAAGAATACTTCTATTTGCGTGGTGTTCGTCCAGATGGCACAAGTTTTAAGAGTAAGTTTGATTTTGATGTGGGTTA CAAAAATGTTAAAAATGCTACAAAAGTGCAAGATTTGCTTGATAAAATTGGTAAAGAGTTTGGCAATACAAGTAAAAATA AAGTAGTTGATGTGAATTTAAATTTTTGGGGAGAAATTGAAATTAAAAACTTGCAGCCCGGGAATGCAAACTTAGATTTT CATCTTATCTCAAGTGATGCAGATGTAGAGAATCTTGATGATTTACCAGCACTTGGAGCGAGGGTTACAAGTTATCAAAA AAGTCCTTTTATGGGACAATTTTCTCAAAGTCATATTAAAGCCATCAAAGATAATTATGACCATCGCGATTTGAAATTTC CCTCTACATTTCTTACAAAAGACAATTTTCCAGCTACCCTTAGGACAAAGATTAAAGATGTGATTGCCGAAGATGTTAAA ACACTTGTGATTGGAGGAACGCGTCCAAATCACGATGATGGAACAATTAATGAAGAGCCTATTGAGGCATTAAATATTAA TGTTGATGATGATTTAGAAGTGCAAGATTTGCTTGAAATGATTAAAAAACATTTTGGTGGTAAGATTGAAGGTGAGATTA TACGCGGAGAGATTGTATTACGAGATATGAATGTAACTCATAAAGATAAGGATATGATGGATTTACCATTTAATGGACCA AGTGGTTTTAGTCTTTCACTTACTACACTTAATGATATGGGAGTGGAGACAAAAGGTATAAGGCGTGATTATCGCACTGA ATATGATCAAGTAAGTTTTGATAATCAAGGTTCTAAACTTATTTCTAATGTATCACAGATACTTGCAAATGGTATGGGTT ATGCAAATGATGAAACAAAACTTTCTGAAGTGGCAGGAGGTAGTCTTGATGGGCAAACTTATCATTTAGTTCTTGATGAT CATAATGGGATACCTGTAAATGCAAGGATTGAATTAAGCAATAAGGGTTCATATTTAGTGTTGCCAAATGCAGACTTTAA TATAAATGACCCAAAATCTCAACAAGAATTTTTTATTCCGTTGTATAATCCGCACGATGAGCCACCAGCGGTTAGCGTTA CCAAAGCCGATGATGTTACTTATCGTCAGATTCTTGACACAATCGGCATTGCACTTAATTATAGTAATCAGCCTATGGAG CACTACCTTGCCTTGCAAACACAAAATGGCTTGCCAACTCAAGCAGGAAAAAGTGCTTATGAGGCACTTTTAAAACAAAC AAAGGGCAATGTGAGCGTATATTTGAGTTATGATGGACGTATTGAAATTAGTGATGAAATGCGCTCTGTTTCACGTATGA AATTTATGATGTATAATGCTTCAAGCAGCGATTTTAGTGAACAAAGTATCCACAATCATCGTGCTTCACTTACTTTCAAT GCTAATAACGCTCTTGTAATTGACCAGCCAGATGTAGATTTTTTCCGCTCACTTGATGGTATTATTGAAGCAGTCCGAGC AGGAGTATATCGTCCTGATGCTTATGGGGAAGAATACACAAGTGAAATGCGTAATAAGGGAATCCAAAATGGTATTGAGC TTTTTGGGCATTTGAGCGATCATATTGAGAAAATGATAGCATTAAATGGAGCACATAGTCGCAGTTTTGAGAATACAATT AGACGTAATGAAGTGTTACGTGTGCAAATAGAATCTATTAAGAGTGATGTAATTGGCACAGATATTGCTCAAACTTATAA TCATTTTTCCAATCTTACTACAAATTATAATGCAGTGCTCGCTTCAACAAGCAGAATTAATCAAATGTCGTTGGTAAATT ATCTATGA
Upstream 100 bases:
>100_bases TTTAAAGAAGAAACAAGATTTTGCAAAAAAGGTATTATTTTTGCTTAAAATGCCGATGTAGAGAGATGATTAATATACAA ATCAAAGTAAGGAATAACTA
Downstream 100 bases:
>100_bases TATGTATTCCTATACTCCGATATACTCATATTCGTGATATGCAAGATTCTCATAGCGTATCTTTGGGGACTTTTGAAAAA CAAATTCAGTATTTGCATAA
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MRVTFGTKYNQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLDQGIDVGNDAYTSTLNTDKAL SELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEHMINIANTSIGGEFLFAGSNVKIRPFDPDGTYKGNNETLEA LVSNNNPIPYNITGEELFFGRDSDHHKSITTNIRKFNQTKLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNN GKEYFYLRGVRPDGTSFKSKFDFDVGYKNVKNATKVQDLLDKIGKEFGNTSKNKVVDVNLNFWGEIEIKNLQPGNANLDF HLISSDADVENLDDLPALGARVTSYQKSPFMGQFSQSHIKAIKDNYDHRDLKFPSTFLTKDNFPATLRTKIKDVIAEDVK TLVIGGTRPNHDDGTINEEPIEALNINVDDDLEVQDLLEMIKKHFGGKIEGEIIRGEIVLRDMNVTHKDKDMMDLPFNGP SGFSLSLTTLNDMGVETKGIRRDYRTEYDQVSFDNQGSKLISNVSQILANGMGYANDETKLSEVAGGSLDGQTYHLVLDD HNGIPVNARIELSNKGSYLVLPNADFNINDPKSQQEFFIPLYNPHDEPPAVSVTKADDVTYRQILDTIGIALNYSNQPME HYLALQTQNGLPTQAGKSAYEALLKQTKGNVSVYLSYDGRIEISDEMRSVSRMKFMMYNASSSDFSEQSIHNHRASLTFN ANNALVIDQPDVDFFRSLDGIIEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSDHIEKMIALNGAHSRSFENTI RRNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVLASTSRINQMSLVNYL
Sequences:
>Translated_855_residues MRVTFGTKYNQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLDQGIDVGNDAYTSTLNTDKAL SELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEHMINIANTSIGGEFLFAGSNVKIRPFDPDGTYKGNNETLEA LVSNNNPIPYNITGEELFFGRDSDHHKSITTNIRKFNQTKLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNN GKEYFYLRGVRPDGTSFKSKFDFDVGYKNVKNATKVQDLLDKIGKEFGNTSKNKVVDVNLNFWGEIEIKNLQPGNANLDF HLISSDADVENLDDLPALGARVTSYQKSPFMGQFSQSHIKAIKDNYDHRDLKFPSTFLTKDNFPATLRTKIKDVIAEDVK TLVIGGTRPNHDDGTINEEPIEALNINVDDDLEVQDLLEMIKKHFGGKIEGEIIRGEIVLRDMNVTHKDKDMMDLPFNGP SGFSLSLTTLNDMGVETKGIRRDYRTEYDQVSFDNQGSKLISNVSQILANGMGYANDETKLSEVAGGSLDGQTYHLVLDD HNGIPVNARIELSNKGSYLVLPNADFNINDPKSQQEFFIPLYNPHDEPPAVSVTKADDVTYRQILDTIGIALNYSNQPME HYLALQTQNGLPTQAGKSAYEALLKQTKGNVSVYLSYDGRIEISDEMRSVSRMKFMMYNASSSDFSEQSIHNHRASLTFN ANNALVIDQPDVDFFRSLDGIIEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSDHIEKMIALNGAHSRSFENTI RRNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVLASTSRINQMSLVNYL >Mature_855_residues MRVTFGTKYNQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLDQGIDVGNDAYTSTLNTDKAL SELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEHMINIANTSIGGEFLFAGSNVKIRPFDPDGTYKGNNETLEA LVSNNNPIPYNITGEELFFGRDSDHHKSITTNIRKFNQTKLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNN GKEYFYLRGVRPDGTSFKSKFDFDVGYKNVKNATKVQDLLDKIGKEFGNTSKNKVVDVNLNFWGEIEIKNLQPGNANLDF HLISSDADVENLDDLPALGARVTSYQKSPFMGQFSQSHIKAIKDNYDHRDLKFPSTFLTKDNFPATLRTKIKDVIAEDVK TLVIGGTRPNHDDGTINEEPIEALNINVDDDLEVQDLLEMIKKHFGGKIEGEIIRGEIVLRDMNVTHKDKDMMDLPFNGP SGFSLSLTTLNDMGVETKGIRRDYRTEYDQVSFDNQGSKLISNVSQILANGMGYANDETKLSEVAGGSLDGQTYHLVLDD HNGIPVNARIELSNKGSYLVLPNADFNINDPKSQQEFFIPLYNPHDEPPAVSVTKADDVTYRQILDTIGIALNYSNQPME HYLALQTQNGLPTQAGKSAYEALLKQTKGNVSVYLSYDGRIEISDEMRSVSRMKFMMYNASSSDFSEQSIHNHRASLTFN ANNALVIDQPDVDFFRSLDGIIEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSDHIEKMIALNGAHSRSFENTI RRNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVLASTSRINQMSLVNYL
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 96078; Mature: 96078
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTFGTKYNQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLD CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCEEEEEEECCC QGIDVGNDAYTSTLNTDKALSELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MINIANTSIGGEFLFAGSNVKIRPFDPDGTYKGNNETLEALVSNNNPIPYNITGEELFFG HHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEECCCEEEEC RDSDHHKSITTNIRKFNQTKLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNN CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEEEECHHHHHHHCCCCCCCCCC GKEYFYLRGVRPDGTSFKSKFDFDVGYKNVKNATKVQDLLDKIGKEFGNTSKNKVVDVNL CCEEEEEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NFWGEIEIKNLQPGNANLDFHLISSDADVENLDDLPALGARVTSYQKSPFMGQFSQSHIK CEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AIKDNYDHRDLKFPSTFLTKDNFPATLRTKIKDVIAEDVKTLVIGGTRPNHDDGTINEEP HHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC IEALNINVDDDLEVQDLLEMIKKHFGGKIEGEIIRGEIVLRDMNVTHKDKDMMDLPFNGP CEEEECCCCCCCCHHHHHHHHHHHCCCCEECEEEEEEEEEEECCCCCCCCCCEECCCCCC SGFSLSLTTLNDMGVETKGIRRDYRTEYDQVSFDNQGSKLISNVSQILANGMGYANDETK CCCEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH LSEVAGGSLDGQTYHLVLDDHNGIPVNARIELSNKGSYLVLPNADFNINDPKSQQEFFIP HHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE LYNPHDEPPAVSVTKADDVTYRQILDTIGIALNYSNQPMEHYLALQTQNGLPTQAGKSAY EECCCCCCCEEEEECCCCHHHHHHHHHHCEEEECCCCCHHHEEEEEECCCCCCCCCHHHH EALLKQTKGNVSVYLSYDGRIEISDEMRSVSRMKFMMYNASSSDFSEQSIHNHRASLTFN HHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCEEEEEC ANNALVIDQPDVDFFRSLDGIIEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSD CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH HIEKMIALNGAHSRSFENTIRRNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVL HHHHHHHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE ASTSRINQMSLVNYL EECHHCCHHHHHHCC >Mature Secondary Structure MRVTFGTKYNQMNYYQGTMQSKLMDMNTKIASGLKIQYGYQDSSVFNQNLKLEYEKINLD CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCEEEEEEECCC QGIDVGNDAYTSTLNTDKALSELSQTAEQFNTKLIQAANDIHSPTSREAIARDLEKLKEH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MINIANTSIGGEFLFAGSNVKIRPFDPDGTYKGNNETLEALVSNNNPIPYNITGEELFFG HHHHHCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEECCCEEEEC RDSDHHKSITTNIRKFNQTKLNNDIMDRIKRGDIPEEVYIKVGDTLRDLLGDNDDDTSNN CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEEEECHHHHHHHCCCCCCCCCC GKEYFYLRGVRPDGTSFKSKFDFDVGYKNVKNATKVQDLLDKIGKEFGNTSKNKVVDVNL CCEEEEEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NFWGEIEIKNLQPGNANLDFHLISSDADVENLDDLPALGARVTSYQKSPFMGQFSQSHIK CEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH AIKDNYDHRDLKFPSTFLTKDNFPATLRTKIKDVIAEDVKTLVIGGTRPNHDDGTINEEP HHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCC IEALNINVDDDLEVQDLLEMIKKHFGGKIEGEIIRGEIVLRDMNVTHKDKDMMDLPFNGP CEEEECCCCCCCCHHHHHHHHHHHCCCCEECEEEEEEEEEEECCCCCCCCCCEECCCCCC SGFSLSLTTLNDMGVETKGIRRDYRTEYDQVSFDNQGSKLISNVSQILANGMGYANDETK CCCEEEEEEECCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH LSEVAGGSLDGQTYHLVLDDHNGIPVNARIELSNKGSYLVLPNADFNINDPKSQQEFFIP HHHHCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEE LYNPHDEPPAVSVTKADDVTYRQILDTIGIALNYSNQPMEHYLALQTQNGLPTQAGKSAY EECCCCCCCEEEEECCCCHHHHHHHHHHCEEEECCCCCHHHEEEEEECCCCCCCCCHHHH EALLKQTKGNVSVYLSYDGRIEISDEMRSVSRMKFMMYNASSSDFSEQSIHNHRASLTFN HHHHHHCCCCEEEEEEECCEEEEHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCEEEEEC ANNALVIDQPDVDFFRSLDGIIEAVRAGVYRPDAYGEEYTSEMRNKGIQNGIELFGHLSD CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH HIEKMIALNGAHSRSFENTIRRNEVLRVQIESIKSDVIGTDIAQTYNHFSNLTTNYNAVL HHHHHHHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE ASTSRINQMSLVNYL EECHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]