| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267042
Identifier: 32267042
GI number: 32267042
Start: 1480257
End: 1480847
Strand: Direct
Name: 32267042
Synonym: HH1543
Alternate gene names: NA
Gene position: 1480257-1480847 (Clockwise)
Preceding gene: 32267041
Following gene: 32267043
Centisome position: 82.28
GC content: 33.84
Gene sequence:
>591_bases GTGCAGCAGGATTTTGCGCAAACTAATAAAATCACACAAGAGCTTGATGAAGAATCTGATAAAATGTTTGGAAAAAATCG TAGCGGTGTGTTATTGGGCATTAGTGCGGGATTTATGCCTATGGAATATAAGACTTTATTACATTCTGCAAAAGGTGATT TGGCTGTGGGTGGCGCAAGATTGGGTTATCAATATTTTTCCATCAATAATAGTATATTTGGCTTTAGAATCTATGCTGAT GCACATATTGGCAGAGGAGAAACAGAGAATACTTTAACACAAGTTGAACAAGATTTTATGGCTTGGAATATTGATGTACT TGTTGATTTACGTATTCCTAATACTTATCAATATATTGGGTTTTTTAGTGGAGTTGGATTTGGAAGTTTAAATTTTGAAA GCACAAGTATATTGAACTATGTGTATTTAAAAGGTGGAAGAAATTTTTATAATTTTGGTTTGGCTTTTACCGGTGGTGCA AAACATCATTTGGAGTTGTATTGCAAAATGCCGATGAAAGCAAACTATGATGAGGAATTTTATTGGAAAAGCCCAATGCT CGCAGGCATAGCTTATCAATATACTTTTTAA
Upstream 100 bases:
>100_bases CTCAACAAGCCATAGAGGAACAAAAGAATTAGAAAAGCTTGAGCAGAGGCTCAAATCACTTCAATATTCCTATCCTGAAG AAAAATTACAAAATAATCCT
Downstream 100 bases:
>100_bases TATAATAAATTGATATTGTTACTATTGAGTTACTTGTGCGTATTACAATAGCATTTCAATAACAATTTGTTATTAATATT TTTTATTAGGAGTTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MQQDFAQTNKITQELDEESDKMFGKNRSGVLLGISAGFMPMEYKTLLHSAKGDLAVGGARLGYQYFSINNSIFGFRIYAD AHIGRGETENTLTQVEQDFMAWNIDVLVDLRIPNTYQYIGFFSGVGFGSLNFESTSILNYVYLKGGRNFYNFGLAFTGGA KHHLELYCKMPMKANYDEEFYWKSPMLAGIAYQYTF
Sequences:
>Translated_196_residues MQQDFAQTNKITQELDEESDKMFGKNRSGVLLGISAGFMPMEYKTLLHSAKGDLAVGGARLGYQYFSINNSIFGFRIYAD AHIGRGETENTLTQVEQDFMAWNIDVLVDLRIPNTYQYIGFFSGVGFGSLNFESTSILNYVYLKGGRNFYNFGLAFTGGA KHHLELYCKMPMKANYDEEFYWKSPMLAGIAYQYTF >Mature_196_residues MQQDFAQTNKITQELDEESDKMFGKNRSGVLLGISAGFMPMEYKTLLHSAKGDLAVGGARLGYQYFSINNSIFGFRIYAD AHIGRGETENTLTQVEQDFMAWNIDVLVDLRIPNTYQYIGFFSGVGFGSLNFESTSILNYVYLKGGRNFYNFGLAFTGGA KHHLELYCKMPMKANYDEEFYWKSPMLAGIAYQYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22270; Mature: 22270
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQDFAQTNKITQELDEESDKMFGKNRSGVLLGISAGFMPMEYKTLLHSAKGDLAVGGAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCHH LGYQYFSINNSIFGFRIYADAHIGRGETENTLTQVEQDFMAWNIDVLVDLRIPNTYQYIG HCEEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCEEEEE FFSGVGFGSLNFESTSILNYVYLKGGRNFYNFGLAFTGGAKHHLELYCKMPMKANYDEEF EECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCE YWKSPMLAGIAYQYTF EECCCCEEEEEEEEEC >Mature Secondary Structure MQQDFAQTNKITQELDEESDKMFGKNRSGVLLGISAGFMPMEYKTLLHSAKGDLAVGGAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEECCHH LGYQYFSINNSIFGFRIYADAHIGRGETENTLTQVEQDFMAWNIDVLVDLRIPNTYQYIG HCEEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCEEEEE FFSGVGFGSLNFESTSILNYVYLKGGRNFYNFGLAFTGGAKHHLELYCKMPMKANYDEEF EECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCE YWKSPMLAGIAYQYTF EECCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA