| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32267013
Identifier: 32267013
GI number: 32267013
Start: 1453537
End: 1454409
Strand: Direct
Name: 32267013
Synonym: HH1514
Alternate gene names: NA
Gene position: 1453537-1454409 (Clockwise)
Preceding gene: 32267012
Following gene: 32267018
Centisome position: 80.79
GC content: 36.54
Gene sequence:
>873_bases ATGAAGTCAATTTTAGTAGGTGCAGTGGCGTATGCGCCACAAATTGTCCCTATTTGGGATACGATTAGGGAATATGCTAA TGATTATTTTAAAGATATAAGGCTAGATTATGTGTTATTTAGCAACTATGAGCGGCAAGTGCAGTGGCTTAAAGAGGGAA AAATAGATATTGCTTGGAATACAAATGTGGCTTTTATTCGCTCTAAGCATTGCACAAATAATGGTGCAGAGGCAATTTTA ATGCGCGATACTGATATTGGCTTTAAAAGTGTATTTGTAGCCAAGAGAGATACAATGAAGGGCTTAGAGGATTTGAAGGG TAAAAAATTTGGTTTAGGGAGTTTAGATTCTGCTCAAGCGGCGATTATGCCTTTATTTTACTTGCAGCAAAGTGCATTGA ATCTTAGAGAAATGCCACTTGATTCACTCAATCAAAAAGGCACAGATGATATGCTTAGAATCTTCCGCTTTAATAGCGAT GTGGGCAAACACGGCGATACAGGGCGAAGTGAATTTGATGTGCTGGATAAAATAAAAAGTGGAGAATTAGATGCAGGAGC TATTGGCTCTACTACTTGGGTGAGGGTTATGCAAGAGGGAAATTATCCTCAAATGGTGAATTTTTACACAAGCCCTGATT ATTGTCATTGTAATTTTACAACCCTAAAAAGTTTTGATTCTTACTTAAAAAGAAGCTTTGTAGAAATGATGAAATCACAA AATGCCCTTAAAAATGACCCAAAAATTGCACATATGATGAGTTTAGAGGGACTTAATGAATGGGTTTTATGCGATCAAGA TGCACTGAAGGGTTATGAAGAGATTGCTCAAGCAATGAAAGAACAACATCTTTTAGACATAGCGAATTATTAA
Upstream 100 bases:
>100_bases AGCGATATTTGCGAGATGCGTTCGCTTCACAAGTAATGGCGCCAAGTCTTGATATTTTACAAGTGTGGCTCTCTGATGCA CTTTTACCAAAGGAGTAAAT
Downstream 100 bases:
>100_bases CAATTATGTGTGCTAAGTAGGCTTTCAAGGAAAATAGTGGCATAGCTTCCTTTAGGGAGATGAAAATGCAATTCAAAATG TGCCTCTTGTGGAATATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKSILVGAVAYAPQIVPIWDTIREYANDYFKDIRLDYVLFSNYERQVQWLKEGKIDIAWNTNVAFIRSKHCTNNGAEAIL MRDTDIGFKSVFVAKRDTMKGLEDLKGKKFGLGSLDSAQAAIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSD VGKHGDTGRSEFDVLDKIKSGELDAGAIGSTTWVRVMQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMKSQ NALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQHLLDIANY
Sequences:
>Translated_290_residues MKSILVGAVAYAPQIVPIWDTIREYANDYFKDIRLDYVLFSNYERQVQWLKEGKIDIAWNTNVAFIRSKHCTNNGAEAIL MRDTDIGFKSVFVAKRDTMKGLEDLKGKKFGLGSLDSAQAAIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSD VGKHGDTGRSEFDVLDKIKSGELDAGAIGSTTWVRVMQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMKSQ NALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQHLLDIANY >Mature_290_residues MKSILVGAVAYAPQIVPIWDTIREYANDYFKDIRLDYVLFSNYERQVQWLKEGKIDIAWNTNVAFIRSKHCTNNGAEAIL MRDTDIGFKSVFVAKRDTMKGLEDLKGKKFGLGSLDSAQAAIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSD VGKHGDTGRSEFDVLDKIKSGELDAGAIGSTTWVRVMQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMKSQ NALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQHLLDIANY
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33102; Mature: 33102
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILVGAVAYAPQIVPIWDTIREYANDYFKDIRLDYVLFSNYERQVQWLKEGKIDIAWN CCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCEEEEEC TNVAFIRSKHCTNNGAEAILMRDTDIGFKSVFVAKRDTMKGLEDLKGKKFGLGSLDSAQA CCEEEEEECCCCCCCCCEEEEECCCCCHHHEEEEHHHHHHHHHHHCCCCCCCCCCCCHHH AIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSDVGKHGDTGRSEFDVLDKIKS HHHHHHHHHHHHCCHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC GELDAGAIGSTTWVRVMQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMKSQ CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHC NALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQHLLDIANY HHCCCCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSILVGAVAYAPQIVPIWDTIREYANDYFKDIRLDYVLFSNYERQVQWLKEGKIDIAWN CCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCCEEEEEC TNVAFIRSKHCTNNGAEAILMRDTDIGFKSVFVAKRDTMKGLEDLKGKKFGLGSLDSAQA CCEEEEEECCCCCCCCCEEEEECCCCCHHHEEEEHHHHHHHHHHHCCCCCCCCCCCCHHH AIMPLFYLQQSALNLREMPLDSLNQKGTDDMLRIFRFNSDVGKHGDTGRSEFDVLDKIKS HHHHHHHHHHHHCCHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC GELDAGAIGSTTWVRVMQEGNYPQMVNFYTSPDYCHCNFTTLKSFDSYLKRSFVEMMKSQ CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHC NALKNDPKIAHMMSLEGLNEWVLCDQDALKGYEEIAQAMKEQHLLDIANY HHCCCCCCHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA