| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266969
Identifier: 32266969
GI number: 32266969
Start: 1411334
End: 1413265
Strand: Direct
Name: 32266969
Synonym: HH1470
Alternate gene names: NA
Gene position: 1411334-1413265 (Clockwise)
Preceding gene: 32266968
Following gene: 32266970
Centisome position: 78.44
GC content: 40.11
Gene sequence:
>1932_bases ATGAAAAGCTTAGTTTCACGCTTATATGCCTTTGTTTTCTTCTTTTTTAGCCTTTGTGTGCCCTTTTATACTGCTCTTGC GCTTGAAAATCCTAAGCAAGTCTCCCAAAAGCTTGCCAATAAGCCCAAAGACAGACCCATTGCCTTTGTAAGTAAGCCTG ATTCGTTGACGCAGTGTCTCACGCCAGTCTTTACAAACTCTGAGGGTTATGTGAGTGTAAGTGATTGCGAAGAAGCAATA GATGCGCGTTATGATGTCTTTAGCCGCATAGCGTGGAAACTTCGCGATGGTTGGGTGTGTTTAAGTGCAGAAAATGAAAA GTATAATCAAGGTAAGCGACTCATCTTAAGACCTTGCGTTATTGATGATAAAACGCAAAGTTTCACAATCAAAGACAATA TGCTATATACTCCTGATTTGCGATTTGTGGTTCGTATTGCCAATGGATTCCTTACTCTGCAAAAAAGCCAATCTAAAGGT GCGCAATCTAATCTTATCCTCCATAATATGCAAGAATGGCTTGATACAATAGCCACTCCTGCACCCTTAATGCAAAAGGG CTTTATCGCCTGGAAATTCATTAGCCCTCAAGGTTTTGATGTATATTATTTGCGTAATAACGAATCGATTAAAAATGACC CGCAAGAGCTTTATTTCAACCTTGAAAATGGCATTATCGCACAATATGATTCAGCAAGTGCAAAGATGTTTTGTCTTACT TCTAAGCAGAATGCAAAGCAAGATTGGAATTGGGCGAGTTGGGAAGAATGTTTGCAGCAAAATTTGCGAGAAAATAAAGC AGCACCATCTAAATTAAATGCGCAAAATTGGAAACTTTTTATGTTTGCGGATAATGATAGCGCAATGCTTAAGGATTATT TAGGCAATTTTTTACGCGTTACCAAATATGGCTCAAATTGGGGTGTGCCTTATACCGCTAAGGCAGATTATTTAGCTAAA GATACAAATGAGGGGCAGACTTCCTATTTTCAATTTAGACACGATATGCAAGATTGGGAAAGATTTAAAAATGCAAATCT TTCAGATTCTCTCCCCACTTGCCCTGCAAATGGCTCTTATGCAAAGAATCTAAAAGCAAGTGTAAAATTACCCCCTAGCT TTGTCTTAACGCAAGAGTGGAAAAAGCGATTATGGCAGATTGCAACGACAACCGATGGCGTCTTAGAAAGAGCTGGAGAT TGTGGCGTGTGTTTATTGCATAGCTATCAAATGATTGCTGAAATGAATGAATATACCGCTACTCCGCTAGAATCTGGAGG CTTTTTCTTTGATACAGCTTTTGGACGTAATCCTTTTACTTCTTTTCGTGCGCGTTATCCAATGCTTGCTGCTTCGCTTG AACAATATCGTGCCTCTAATACTCCACCGGGCTTATCTCGCTCTGCTGTGTTTGCATACGCAGCACAGATGTATAGAGCC ATTGCCTTAAGCCTTTTTCCCGGACATTTTTGGCTCTCTTCAGAGTTTGCCACAAGTGATGTTACAATAAGAAGTGCGTT GAGAGATTTGTTTCAACAACCTGCTGGGACTTTATGGGTGGTGCAGATGTATTATGTCGCACGAGATGGTAGCTTCAATG GACACGGAATGCCTGTGCTAAGGACAGGTGATGGAATCCAATTTATCCCAACTAACTTAACAAATATGAACTATGAGGGA TATGAGCGGGCATTATCCAATTCTTTTGCACATAATTTAAGAGAGGCATACAATGTCGTTACGCGCAATGGCACACTCAA CTTATATATGCTTTATTCCTTGCGTTTGCGTGAGATTTATCCTAATCCCATTAATGCATTTGTATCTAATAATAATTGTA GCGGTGAGGGGGAAGATAGGAGAGGAACTCGCAATATGCCCCTTAGTCGTTTTATCAATCAATGTGCAAGTGGGAGATGT GTTTTGCAATAA
Upstream 100 bases:
>100_bases AAGTTTCTACATCTTAAGGGCATTTATAGGCAGGTAGAAATTTTATATTCAGCCAAAACTGCTATAATAAACACAAGTTA GATACCCCAAAAGGATATAT
Downstream 100 bases:
>100_bases CGCATTAAGCAATGTGCTTGGGAGTCCTTGCCTTGCAAATTTTATGCGTGGTTGTAAAAGTTTTTGATTTACTCTAGCTT TAGAATCTAGCATTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MKSLVSRLYAFVFFFFSLCVPFYTALALENPKQVSQKLANKPKDRPIAFVSKPDSLTQCLTPVFTNSEGYVSVSDCEEAI DARYDVFSRIAWKLRDGWVCLSAENEKYNQGKRLILRPCVIDDKTQSFTIKDNMLYTPDLRFVVRIANGFLTLQKSQSKG AQSNLILHNMQEWLDTIATPAPLMQKGFIAWKFISPQGFDVYYLRNNESIKNDPQELYFNLENGIIAQYDSASAKMFCLT SKQNAKQDWNWASWEECLQQNLRENKAAPSKLNAQNWKLFMFADNDSAMLKDYLGNFLRVTKYGSNWGVPYTAKADYLAK DTNEGQTSYFQFRHDMQDWERFKNANLSDSLPTCPANGSYAKNLKASVKLPPSFVLTQEWKKRLWQIATTTDGVLERAGD CGVCLLHSYQMIAEMNEYTATPLESGGFFFDTAFGRNPFTSFRARYPMLAASLEQYRASNTPPGLSRSAVFAYAAQMYRA IALSLFPGHFWLSSEFATSDVTIRSALRDLFQQPAGTLWVVQMYYVARDGSFNGHGMPVLRTGDGIQFIPTNLTNMNYEG YERALSNSFAHNLREAYNVVTRNGTLNLYMLYSLRLREIYPNPINAFVSNNNCSGEGEDRRGTRNMPLSRFINQCASGRC VLQ
Sequences:
>Translated_643_residues MKSLVSRLYAFVFFFFSLCVPFYTALALENPKQVSQKLANKPKDRPIAFVSKPDSLTQCLTPVFTNSEGYVSVSDCEEAI DARYDVFSRIAWKLRDGWVCLSAENEKYNQGKRLILRPCVIDDKTQSFTIKDNMLYTPDLRFVVRIANGFLTLQKSQSKG AQSNLILHNMQEWLDTIATPAPLMQKGFIAWKFISPQGFDVYYLRNNESIKNDPQELYFNLENGIIAQYDSASAKMFCLT SKQNAKQDWNWASWEECLQQNLRENKAAPSKLNAQNWKLFMFADNDSAMLKDYLGNFLRVTKYGSNWGVPYTAKADYLAK DTNEGQTSYFQFRHDMQDWERFKNANLSDSLPTCPANGSYAKNLKASVKLPPSFVLTQEWKKRLWQIATTTDGVLERAGD CGVCLLHSYQMIAEMNEYTATPLESGGFFFDTAFGRNPFTSFRARYPMLAASLEQYRASNTPPGLSRSAVFAYAAQMYRA IALSLFPGHFWLSSEFATSDVTIRSALRDLFQQPAGTLWVVQMYYVARDGSFNGHGMPVLRTGDGIQFIPTNLTNMNYEG YERALSNSFAHNLREAYNVVTRNGTLNLYMLYSLRLREIYPNPINAFVSNNNCSGEGEDRRGTRNMPLSRFINQCASGRC VLQ >Mature_643_residues MKSLVSRLYAFVFFFFSLCVPFYTALALENPKQVSQKLANKPKDRPIAFVSKPDSLTQCLTPVFTNSEGYVSVSDCEEAI DARYDVFSRIAWKLRDGWVCLSAENEKYNQGKRLILRPCVIDDKTQSFTIKDNMLYTPDLRFVVRIANGFLTLQKSQSKG AQSNLILHNMQEWLDTIATPAPLMQKGFIAWKFISPQGFDVYYLRNNESIKNDPQELYFNLENGIIAQYDSASAKMFCLT SKQNAKQDWNWASWEECLQQNLRENKAAPSKLNAQNWKLFMFADNDSAMLKDYLGNFLRVTKYGSNWGVPYTAKADYLAK DTNEGQTSYFQFRHDMQDWERFKNANLSDSLPTCPANGSYAKNLKASVKLPPSFVLTQEWKKRLWQIATTTDGVLERAGD CGVCLLHSYQMIAEMNEYTATPLESGGFFFDTAFGRNPFTSFRARYPMLAASLEQYRASNTPPGLSRSAVFAYAAQMYRA IALSLFPGHFWLSSEFATSDVTIRSALRDLFQQPAGTLWVVQMYYVARDGSFNGHGMPVLRTGDGIQFIPTNLTNMNYEG YERALSNSFAHNLREAYNVVTRNGTLNLYMLYSLRLREIYPNPINAFVSNNNCSGEGEDRRGTRNMPLSRFINQCASGRC VLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73262; Mature: 73262
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLVSRLYAFVFFFFSLCVPFYTALALENPKQVSQKLANKPKDRPIAFVSKPDSLTQCL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHH TPVFTNSEGYVSVSDCEEAIDARYDVFSRIAWKLRDGWVCLSAENEKYNQGKRLILRPCV HHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEE IDDKTQSFTIKDNMLYTPDLRFVVRIANGFLTLQKSQSKGAQSNLILHNMQEWLDTIATP ECCCCCEEEEECCEEECCCHHHHHEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC APLMQKGFIAWKFISPQGFDVYYLRNNESIKNDPQELYFNLENGIIAQYDSASAKMFCLT CHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEE SKQNAKQDWNWASWEECLQQNLRENKAAPSKLNAQNWKLFMFADNDSAMLKDYLGNFLRV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCEEE TKYGSNWGVPYTAKADYLAKDTNEGQTSYFQFRHDMQDWERFKNANLSDSLPTCPANGSY EEECCCCCCCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH AKNLKASVKLPPSFVLTQEWKKRLWQIATTTDGVLERAGDCGVCLLHSYQMIAEMNEYTA HHCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC TPLESGGFFFDTAFGRNPFTSFRARYPMLAASLEQYRASNTPPGLSRSAVFAYAAQMYRA CCCCCCCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IALSLFPGHFWLSSEFATSDVTIRSALRDLFQQPAGTLWVVQMYYVARDGSFNGHGMPVL HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEEE RTGDGIQFIPTNLTNMNYEGYERALSNSFAHNLREAYNVVTRNGTLNLYMLYSLRLREIY ECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHC PNPINAFVSNNNCSGEGEDRRGTRNMPLSRFINQCASGRCVLQ CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECC >Mature Secondary Structure MKSLVSRLYAFVFFFFSLCVPFYTALALENPKQVSQKLANKPKDRPIAFVSKPDSLTQCL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHH TPVFTNSEGYVSVSDCEEAIDARYDVFSRIAWKLRDGWVCLSAENEKYNQGKRLILRPCV HHHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEE IDDKTQSFTIKDNMLYTPDLRFVVRIANGFLTLQKSQSKGAQSNLILHNMQEWLDTIATP ECCCCCEEEEECCEEECCCHHHHHEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC APLMQKGFIAWKFISPQGFDVYYLRNNESIKNDPQELYFNLENGIIAQYDSASAKMFCLT CHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEEEECCCCEEEEECCCCCEEEEEE SKQNAKQDWNWASWEECLQQNLRENKAAPSKLNAQNWKLFMFADNDSAMLKDYLGNFLRV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCEEE TKYGSNWGVPYTAKADYLAKDTNEGQTSYFQFRHDMQDWERFKNANLSDSLPTCPANGSY EEECCCCCCCEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH AKNLKASVKLPPSFVLTQEWKKRLWQIATTTDGVLERAGDCGVCLLHSYQMIAEMNEYTA HHCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCC TPLESGGFFFDTAFGRNPFTSFRARYPMLAASLEQYRASNTPPGLSRSAVFAYAAQMYRA CCCCCCCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH IALSLFPGHFWLSSEFATSDVTIRSALRDLFQQPAGTLWVVQMYYVARDGSFNGHGMPVL HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEEE RTGDGIQFIPTNLTNMNYEGYERALSNSFAHNLREAYNVVTRNGTLNLYMLYSLRLREIY ECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHC PNPINAFVSNNNCSGEGEDRRGTRNMPLSRFINQCASGRCVLQ CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA