| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is folD
Identifier: 32266865
GI number: 32266865
Start: 1321061
End: 1321921
Strand: Direct
Name: folD
Synonym: HH1366
Alternate gene names: 32266865
Gene position: 1321061-1321921 (Clockwise)
Preceding gene: 32266863
Following gene: 32266866
Centisome position: 73.43
GC content: 39.61
Gene sequence:
>861_bases ATGACATTATTAGATGGCAAATCCTTGAGTGTAACGATTGAGCGTGATTTAACAGAGCAAATTGCTGCACTTGTTTCTCA AGGTGTAACGCCGGGTTTAGCAGTAATTTTGGTTGGCAATAATCCTGCAAGTTGCGCGTATGTGCAGATGAAAGCAAAGG CGTGTAAGCGCGTAGGAATATACTCTGTTACCCACGAAATGCCTTCAAAAATTACACAAGATGAGCTTTTATCTGTTATT GAGATTTTAAATAATGACCCAAATATTGATGGTATACTCGTTCAGCTGCCTTTGCCTGCACACATTCAGACAAGTAAAGT GCTTGAAGCAATCAACCCTAAAAAAGATGTTGATGGTTTTCATCCATTTAATATAGGGCGATTGAGTGTGAATGTTGATA CTTTTGTCCCTGCAACGCCACTTGGTGTAATGAAACTCCTTGAATCTTATCATATTGATGTCCGCGGTAAAGATGTTGTG ATTATAGGTATGAGTAATATTGTGGGTAAGCCGCTTATGAGCCTTATGCTTAATGCAGGAGCAAGTGTAAGTTGTTGTCA TATTCTCACGCGCGATGTGAAACAATATACTAAGAATGCGGATATTGTATGTGTGGCTGTGGGAAAAGTCGGATTACTTA GTGCAGATATGATTAAAGAGGGTGCAGTTGTAGTAGATGTTGGTATTAATCGTTTAGAATCTGGCACACTTGTAGGAGAT GTGGATTTTGAGAATGTCGCACCTAAGAGTAGTTTTATTACACCTGTGCCCGGTGGTGTAGGTCCTATGACTATTGTTAG CCTACTTCAAAATACTTATAAGGCTGCAATGTATCGTTTAGAGCAAAGGATGCGAGTATGA
Upstream 100 bases:
>100_bases AGAAACAATATCAGCTTTTTATTCATAAATCCTCACTTAAACGATATTTCTTTAATATCTTATATTATAATAACACAATG ATAATCACAAAGGCTTTAAA
Downstream 100 bases:
>100_bases AAAAGTTTTTAAGTGCATTATGGGCATTTGCTTCAAGCTGGACAGGGACGATTGTTATCGTGCTTATTTTAATATTTTTT GTTATGCAAGCGTTTGTTAT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTLLDGKSLSVTIERDLTEQIAALVSQGVTPGLAVILVGNNPASCAYVQMKAKACKRVGIYSVTHEMPSKITQDELLSVI EILNNDPNIDGILVQLPLPAHIQTSKVLEAINPKKDVDGFHPFNIGRLSVNVDTFVPATPLGVMKLLESYHIDVRGKDVV IIGMSNIVGKPLMSLMLNAGASVSCCHILTRDVKQYTKNADIVCVAVGKVGLLSADMIKEGAVVVDVGINRLESGTLVGD VDFENVAPKSSFITPVPGGVGPMTIVSLLQNTYKAAMYRLEQRMRV
Sequences:
>Translated_286_residues MTLLDGKSLSVTIERDLTEQIAALVSQGVTPGLAVILVGNNPASCAYVQMKAKACKRVGIYSVTHEMPSKITQDELLSVI EILNNDPNIDGILVQLPLPAHIQTSKVLEAINPKKDVDGFHPFNIGRLSVNVDTFVPATPLGVMKLLESYHIDVRGKDVV IIGMSNIVGKPLMSLMLNAGASVSCCHILTRDVKQYTKNADIVCVAVGKVGLLSADMIKEGAVVVDVGINRLESGTLVGD VDFENVAPKSSFITPVPGGVGPMTIVSLLQNTYKAAMYRLEQRMRV >Mature_285_residues TLLDGKSLSVTIERDLTEQIAALVSQGVTPGLAVILVGNNPASCAYVQMKAKACKRVGIYSVTHEMPSKITQDELLSVIE ILNNDPNIDGILVQLPLPAHIQTSKVLEAINPKKDVDGFHPFNIGRLSVNVDTFVPATPLGVMKLLESYHIDVRGKDVVI IGMSNIVGKPLMSLMLNAGASVSCCHILTRDVKQYTKNADIVCVAVGKVGLLSADMIKEGAVVVDVGINRLESGTLVGDV DFENVAPKSSFITPVPGGVGPMTIVSLLQNTYKAAMYRLEQRMRV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=299, Percent_Identity=45.4849498327759, Blast_Score=227, Evalue=7e-60, Organism=Homo sapiens, GI222418558, Length=290, Percent_Identity=43.7931034482759, Blast_Score=220, Evalue=9e-58, Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=38.3561643835616, Blast_Score=202, Evalue=2e-52, Organism=Escherichia coli, GI1786741, Length=276, Percent_Identity=50.3623188405797, Blast_Score=292, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17568735, Length=257, Percent_Identity=41.2451361867704, Blast_Score=177, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=44.4444444444444, Blast_Score=237, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=37.8737541528239, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322933, Length=288, Percent_Identity=25.6944444444444, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI17136818, Length=298, Percent_Identity=43.2885906040268, Blast_Score=243, Evalue=8e-65, Organism=Drosophila melanogaster, GI17136816, Length=298, Percent_Identity=43.2885906040268, Blast_Score=243, Evalue=9e-65, Organism=Drosophila melanogaster, GI62472483, Length=291, Percent_Identity=37.4570446735395, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI45551871, Length=291, Percent_Identity=37.4570446735395, Blast_Score=208, Evalue=4e-54, Organism=Drosophila melanogaster, GI24645718, Length=291, Percent_Identity=37.4570446735395, Blast_Score=207, Evalue=5e-54, Organism=Drosophila melanogaster, GI17137370, Length=291, Percent_Identity=37.4570446735395, Blast_Score=207, Evalue=5e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_HELHP (Q7VGF6)
Other databases:
- EMBL: AE017125 - RefSeq: NP_860897.1 - HSSP: P11586 - ProteinModelPortal: Q7VGF6 - SMR: Q7VGF6 - GeneID: 1493054 - GenomeReviews: AE017125_GR - KEGG: hhe:HH1366 - NMPDR: fig|235279.1.peg.1366 - HOGENOM: HBG328751 - OMA: ELNADER - ProtClustDB: PRK14191 - BioCyc: HHEP235279:HH_1366-MONOMER - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30647; Mature: 30516
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDGKSLSVTIERDLTEQIAALVSQGVTPGLAVILVGNNPASCAYVQMKAKACKRVGI CCEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHCCH YSVTHEMPSKITQDELLSVIEILNNDPNIDGILVQLPLPAHIQTSKVLEAINPKKDVDGF HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC HPFNIGRLSVNVDTFVPATPLGVMKLLESYHIDVRGKDVVIIGMSNIVGKPLMSLMLNAG CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCC ASVSCCHILTRDVKQYTKNADIVCVAVGKVGLLSADMIKEGAVVVDVGINRLESGTLVGD CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEC VDFENVAPKSSFITPVPGGVGPMTIVSLLQNTYKAAMYRLEQRMRV CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLLDGKSLSVTIERDLTEQIAALVSQGVTPGLAVILVGNNPASCAYVQMKAKACKRVGI CEECCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHCCH YSVTHEMPSKITQDELLSVIEILNNDPNIDGILVQLPLPAHIQTSKVLEAINPKKDVDGF HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC HPFNIGRLSVNVDTFVPATPLGVMKLLESYHIDVRGKDVVIIGMSNIVGKPLMSLMLNAG CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCC ASVSCCHILTRDVKQYTKNADIVCVAVGKVGLLSADMIKEGAVVVDVGINRLESGTLVGD CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEC VDFENVAPKSSFITPVPGGVGPMTIVSLLQNTYKAAMYRLEQRMRV CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954