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The map label for this gene is rlpA

Identifier: 32266823

GI number: 32266823

Start: 1283404

End: 1284300

Strand: Direct

Name: rlpA

Synonym: HH1324

Alternate gene names: 32266823

Gene position: 1283404-1284300 (Clockwise)

Preceding gene: 32266822

Following gene: 32266824

Centisome position: 71.33

GC content: 38.02

Gene sequence:

>897_bases
ATGAAAGGTCTAAAAAAAATACAAATTGCTATAAGTTTAAGTGTGTTGTGTGGGCTGTTTTGGGGTTGTTTAGGAAAAGA
TACACAATGGAATGAGAACGGGGTAAAAGCAAAGGGTTTTAATGAAAGCTTTAATGATTTAGATGCTTTTAATCAAGGTA
TTACACCTAATATTGGTGGAAACTCTATGCGAGAATCACCTGCTATACAAGAGGCTACTATGCGCCCTTATCAAGTTGCA
GGGAAATGGTACTATCCTGAAAAAGTGAGCCTTGGAGATAAGTTTGATGGATATGCAAGCTGGTATGGTCCAGATTTTCA
TTCTAAAAAGACATCTAATGGTGAGACTTATAATATGTATGCCCATACTGCTGCACATAAGACTTTTCCGATGAATACAG
TTGTAAAAGTGCTTAACGTTGAAAATGGTAAAAGCACCATTGTGCGAATTAATGATAGAGGTCCATTTGTGGAAGGGCGC
ATTATTGATTTAAGCAGTGCCGCTGCACACGATATTGATATGGTAAAAGTTGGCACAGCAAAAGTGCGACTAGAAGTAAT
TGGATTTGGTGGCGTTATTAATAAGGATGCTAAAGTGCAGAATGTGGAGAGCGAAGATATTTTAAGCAATGAGTTTAAAG
TCGCTAACACTCCAAAATCAGTAAATGGTGGGGATTTCGCTATTCAAGTGGGAGCGTTTAGGCGATATGAAGGCGCACAA
ATCACTCAAGAACGATATTCGCATATGCCTCCATATCAGAGTGTGATAAAAGAATTTGAACTTAATGGTGCACCTATTTA
TCGTGTATTTTTGCGGGGATTCCAAAGTGAACAAGAAGCGCGTGATTTCTTAAAAAAGAATACGCAGATTCAAGGAGGAT
TTTTTATCCGTGACTAA

Upstream 100 bases:

>100_bases
TCAAAGGTTCACATATCGCAATTAATCAAAAGCTCATAATTCCTGTGCTCAAAGGCAAATCTACGACGATTGCCGATAAT
AGGTAGAGTAAAGGAATAGA

Downstream 100 bases:

>100_bases
AAAAGAAAAACTAAAGGAGTGAGGTATGCAGGAAAGAATGGCAAAAAATGTTATAGAGATTTCGCGCACAACAAAAGAAA
CAGACATTAGCTTGAAACTT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKGLKKIQIAISLSVLCGLFWGCLGKDTQWNENGVKAKGFNESFNDLDAFNQGITPNIGGNSMRESPAIQEATMRPYQVA
GKWYYPEKVSLGDKFDGYASWYGPDFHSKKTSNGETYNMYAHTAAHKTFPMNTVVKVLNVENGKSTIVRINDRGPFVEGR
IIDLSSAAAHDIDMVKVGTAKVRLEVIGFGGVINKDAKVQNVESEDILSNEFKVANTPKSVNGGDFAIQVGAFRRYEGAQ
ITQERYSHMPPYQSVIKEFELNGAPIYRVFLRGFQSEQEARDFLKKNTQIQGGFFIRD

Sequences:

>Translated_298_residues
MKGLKKIQIAISLSVLCGLFWGCLGKDTQWNENGVKAKGFNESFNDLDAFNQGITPNIGGNSMRESPAIQEATMRPYQVA
GKWYYPEKVSLGDKFDGYASWYGPDFHSKKTSNGETYNMYAHTAAHKTFPMNTVVKVLNVENGKSTIVRINDRGPFVEGR
IIDLSSAAAHDIDMVKVGTAKVRLEVIGFGGVINKDAKVQNVESEDILSNEFKVANTPKSVNGGDFAIQVGAFRRYEGAQ
ITQERYSHMPPYQSVIKEFELNGAPIYRVFLRGFQSEQEARDFLKKNTQIQGGFFIRD
>Mature_298_residues
MKGLKKIQIAISLSVLCGLFWGCLGKDTQWNENGVKAKGFNESFNDLDAFNQGITPNIGGNSMRESPAIQEATMRPYQVA
GKWYYPEKVSLGDKFDGYASWYGPDFHSKKTSNGETYNMYAHTAAHKTFPMNTVVKVLNVENGKSTIVRINDRGPFVEGR
IIDLSSAAAHDIDMVKVGTAKVRLEVIGFGGVINKDAKVQNVESEDILSNEFKVANTPKSVNGGDFAIQVGAFRRYEGAQ
ITQERYSHMPPYQSVIKEFELNGAPIYRVFLRGFQSEQEARDFLKKNTQIQGGFFIRD

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=179, Percent_Identity=29.608938547486, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 33248; Mature: 33248

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLKKIQIAISLSVLCGLFWGCLGKDTQWNENGVKAKGFNESFNDLDAFNQGITPNIGG
CCCCCEEEHEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCC
NSMRESPAIQEATMRPYQVAGKWYYPEKVSLGDKFDGYASWYGPDFHSKKTSNGETYNMY
CCCCCCCCHHHHHCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AHTAAHKTFPMNTVVKVLNVENGKSTIVRINDRGPFVEGRIIDLSSAAAHDIDMVKVGTA
EEECCCCCCCHHHHEEEEECCCCCEEEEEECCCCCEECCEEEECCCCCCCCCEEEEECCE
KVRLEVIGFGGVINKDAKVQNVESEDILSNEFKVANTPKSVNGGDFAIQVGAFRRYEGAQ
EEEEEEEEECCEECCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCEEEEECCEECCCCCH
ITQERYSHMPPYQSVIKEFELNGAPIYRVFLRGFQSEQEARDFLKKNTQIQGGFFIRD
HHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEECCCEEEEC
>Mature Secondary Structure
MKGLKKIQIAISLSVLCGLFWGCLGKDTQWNENGVKAKGFNESFNDLDAFNQGITPNIGG
CCCCCEEEHEEEHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCC
NSMRESPAIQEATMRPYQVAGKWYYPEKVSLGDKFDGYASWYGPDFHSKKTSNGETYNMY
CCCCCCCCHHHHHCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AHTAAHKTFPMNTVVKVLNVENGKSTIVRINDRGPFVEGRIIDLSSAAAHDIDMVKVGTA
EEECCCCCCCHHHHEEEEECCCCCEEEEEECCCCCEECCEEEECCCCCCCCCEEEEECCE
KVRLEVIGFGGVINKDAKVQNVESEDILSNEFKVANTPKSVNGGDFAIQVGAFRRYEGAQ
EEEEEEEEECCEECCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCEEEEECCEECCCCCH
ITQERYSHMPPYQSVIKEFELNGAPIYRVFLRGFQSEQEARDFLKKNTQIQGGFFIRD
HHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]