Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32266813

Identifier: 32266813

GI number: 32266813

Start: 1273345

End: 1273731

Strand: Direct

Name: 32266813

Synonym: HH1314

Alternate gene names: NA

Gene position: 1273345-1273731 (Clockwise)

Preceding gene: 32266811

Following gene: 32266815

Centisome position: 70.77

GC content: 36.43

Gene sequence:

>387_bases
ATGAAAAAGTTAGGTTTGGTTGCTTTTACATTTTTGTTTGTAGGGTGTTTCTCAAATTCGCCTACACCACAGCTAGAGCT
AGAGAAAAATGTTGAGCGAAATATCGCAGAAAAAAATGAAGTTGTGTTCAAAGAGACTTATGGCAAGGTAGTTAATGAAG
TAGATGCTCAAAAGCTTAATGAATGCGTAGCAGCAGCACTTACTAAGCAACTTACACAAAATGAAAAACTTTTTTTGGGT
GGTAGTGCTAAAGAAAGGCTAGAGACTAAAGATGCTTCAGAGTCTGCTTTAAAGAAAATAAGTATTACAAGCAGTGAATC
TAAGGCTGCAATTAAAACTTGTAGCGCTGCTATTGGTGTGGCAAAAGCGATCGGTAAGATAAAGTAA

Upstream 100 bases:

>100_bases
ACACTAGCTTGGTTATGTATAGACTAAAATATATTTGATTTTATTTTTTTGTAATTTTTGAAGGAATAAAATGTCTTTAA
AATTTTTTAGGAGGAATCTT

Downstream 100 bases:

>100_bases
AGGTTTTTGTGCTATTTACTAGCACGAATAATATCCGTAAAGCTTTGTATATTGAGGCTTGCAGAGCCTACAAGCACACC
ATTTACGTAAGGAGTGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKKLGLVAFTFLFVGCFSNSPTPQLELEKNVERNIAEKNEVVFKETYGKVVNEVDAQKLNECVAAALTKQLTQNEKLFLG
GSAKERLETKDASESALKKISITSSESKAAIKTCSAAIGVAKAIGKIK

Sequences:

>Translated_128_residues
MKKLGLVAFTFLFVGCFSNSPTPQLELEKNVERNIAEKNEVVFKETYGKVVNEVDAQKLNECVAAALTKQLTQNEKLFLG
GSAKERLETKDASESALKKISITSSESKAAIKTCSAAIGVAKAIGKIK
>Mature_128_residues
MKKLGLVAFTFLFVGCFSNSPTPQLELEKNVERNIAEKNEVVFKETYGKVVNEVDAQKLNECVAAALTKQLTQNEKLFLG
GSAKERLETKDASESALKKISITSSESKAAIKTCSAAIGVAKAIGKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13825; Mature: 13825

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLGLVAFTFLFVGCFSNSPTPQLELEKNVERNIAEKNEVVFKETYGKVVNEVDAQKLN
CCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECVAAALTKQLTQNEKLFLGGSAKERLETKDASESALKKISITSSESKAAIKTCSAAIGV
HHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AKAIGKIK
HHHHHCCC
>Mature Secondary Structure
MKKLGLVAFTFLFVGCFSNSPTPQLELEKNVERNIAEKNEVVFKETYGKVVNEVDAQKLN
CCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECVAAALTKQLTQNEKLFLGGSAKERLETKDASESALKKISITSSESKAAIKTCSAAIGV
HHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AKAIGKIK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA