| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266811
Identifier: 32266811
GI number: 32266811
Start: 1271792
End: 1272385
Strand: Direct
Name: 32266811
Synonym: HH1312
Alternate gene names: NA
Gene position: 1271792-1272385 (Clockwise)
Preceding gene: 32266803
Following gene: 32266813
Centisome position: 70.69
GC content: 38.55
Gene sequence:
>594_bases ATGAAAAAATTTCTTGCTTTTATATCACTTACTTTTGCATTCTGTGCTTTTGGAGCAGATGAGCAGAAATATCGCTTTAT AGCAGGTGGAAGTATAGGTTCTCAAACCACTTGGTTTAAAAATGCTGATACAAATGTCAAATGGAGTAATATGGGTGAAA CTTTATATAATGAAAAGGGTGGTTTAAGCGGACGCGGTGCGGTGGGTTTGCAGATAAATACAAGCCAAAAGCTTTTTACG CGTATCCTTGCTGAAATTACGCATTCAAACCTCTTAAAAAGCGATTCAAAGCCAACATATCGGAGCTATGGTATTACTTG GGAAGAAGGGTATAGATTCACTCCACGATTTTATACATTTGGCGGACCGGGTGTGCATTATGCACAACTTAAGCTCAATG ATGAGAGCACAAAAGGATTTGGCGTGAATGTGAATCTAGGACTAGGTTTTGTGCTAAGCGATTTTGTCAGCCTTGAGGTA ATGGGACGAGGTAGCTTTCCTTTAAGCGATAAGTTTAAGGAAATAGGAGCTAATAATAATGAATCTCTGCCTATGCGTAT TGACTACCTCGCGAATATTATGATTGCTTTTTAA
Upstream 100 bases:
>100_bases ACTTTATCACAGAATTAATTTTTCTTATGAGATACAATTCGCGCCTCAAATCATTTAAGATTTTGATTTGATATGCTTAT AATCTTATAAAGGAGAGAAA
Downstream 100 bases:
>100_bases GAGCGCAAAATATCCCAACGAGGTGTGATTTTGCCATCGACTTGCTCGGTGGCGCACATACCCATAATATTATATCCTGC ATCTACATAATGCACCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKKFLAFISLTFAFCAFGADEQKYRFIAGGSIGSQTTWFKNADTNVKWSNMGETLYNEKGGLSGRGAVGLQINTSQKLFT RILAEITHSNLLKSDSKPTYRSYGITWEEGYRFTPRFYTFGGPGVHYAQLKLNDESTKGFGVNVNLGLGFVLSDFVSLEV MGRGSFPLSDKFKEIGANNNESLPMRIDYLANIMIAF
Sequences:
>Translated_197_residues MKKFLAFISLTFAFCAFGADEQKYRFIAGGSIGSQTTWFKNADTNVKWSNMGETLYNEKGGLSGRGAVGLQINTSQKLFT RILAEITHSNLLKSDSKPTYRSYGITWEEGYRFTPRFYTFGGPGVHYAQLKLNDESTKGFGVNVNLGLGFVLSDFVSLEV MGRGSFPLSDKFKEIGANNNESLPMRIDYLANIMIAF >Mature_197_residues MKKFLAFISLTFAFCAFGADEQKYRFIAGGSIGSQTTWFKNADTNVKWSNMGETLYNEKGGLSGRGAVGLQINTSQKLFT RILAEITHSNLLKSDSKPTYRSYGITWEEGYRFTPRFYTFGGPGVHYAQLKLNDESTKGFGVNVNLGLGFVLSDFVSLEV MGRGSFPLSDKFKEIGANNNESLPMRIDYLANIMIAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21930; Mature: 21930
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLAFISLTFAFCAFGADEQKYRFIAGGSIGSQTTWFKNADTNVKWSNMGETLYNEKG CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCEEECCCCCHHHCCCC GLSGRGAVGLQINTSQKLFTRILAEITHSNLLKSDSKPTYRSYGITWEEGYRFTPRFYTF CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHCCCEECCEEEEC GGPGVHYAQLKLNDESTKGFGVNVNLGLGFVLSDFVSLEVMGRGSFPLSDKFKEIGANNN CCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHEEEEEEECCCCCCCHHHHHHCCCCC ESLPMRIDYLANIMIAF CCCCEEHHHHHEEEECC >Mature Secondary Structure MKKFLAFISLTFAFCAFGADEQKYRFIAGGSIGSQTTWFKNADTNVKWSNMGETLYNEKG CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCCEEECCCCCHHHCCCC GLSGRGAVGLQINTSQKLFTRILAEITHSNLLKSDSKPTYRSYGITWEEGYRFTPRFYTF CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHCCCEECCEEEEC GGPGVHYAQLKLNDESTKGFGVNVNLGLGFVLSDFVSLEVMGRGSFPLSDKFKEIGANNN CCCCEEEEEEEECCCCCCCEEEEEECCHHHHHHHHEEEEEEECCCCCCCHHHHHHCCCCC ESLPMRIDYLANIMIAF CCCCEEHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA