Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is kch [C]

Identifier: 32266789

GI number: 32266789

Start: 1250353

End: 1251480

Strand: Direct

Name: kch [C]

Synonym: HH1290

Alternate gene names: 32266789

Gene position: 1250353-1251480 (Clockwise)

Preceding gene: 32266788

Following gene: 32266790

Centisome position: 69.5

GC content: 36.7

Gene sequence:

>1128_bases
TTGTTTGCAAGATTTAAGAAATTTCTTCACTGGGGCAATACCCCGAAACCAGACATTTCTTTAGCTGGTGAGCTCTACGA
GCAGCTCAAACCCTTTAGACTTCCGCTTATTCTTGTTCAATTTTTTCTTCTTTTTGGCACATTAGGGTATTTAGCATTAG
AAGATTATGATTTAATGCAGGCATTTTTTCAAACTTCTTATACTTTTACAAATACAGGATTTGGCTCATTAAAAGAAAAT
GAATTTAGCACAATCACTATTTTTTTCACTGTTATTTTAATGGTGTGTGGAGCGGGAGTTGTAACTTTTAGCGTGGCATT
TATTATGAGTGTGGTGAATAATGGCACTCTTATTAGATTAATTAAGGAGCAAAAAATGGTATATAAAATTGCGCGTTTGC
AAAATCATTATGTGATTTGCTATCACAATGAATTTACTACTGAACTTGCCCAGCAGTTTTTAGAAGCTCATATTCCCTTT
GTCGTGGTGGATAATTCTCCTGATTTTGAAGTCCAAGCCCAAAAGCATAAGTATCCTTATTACATTATTGATGACCCACA
TACGCATATAGCTATGCTCAAATCTCACCTCTCAAGTGCAAAAGGTATCATAAGCTTTTCTAAGAATCCTGCGGATAATA
TTACTATGGTGGTGAGTGCACGTATCTTTGAAGAAGAGCTAAGAAGAAAGCCTTATTATATTATCGCTAACGCTAATTCT
CAAGAAGAGAGCAAAAAGCTTAAAAAAATAGGCTGTGATGCCGTAATTTCTGCCTCTAAGCTTATGGCACAGAGAATCTC
TGCAATGGCAGTGCGTCCTGATATGGAGAATCTCCTTGAGCGGTTTTTATATCAACGTGATACGCCGCTTGATTTGGAAG
AAATTATCGTGCCACGTTATTCGTGGCTTGTGCTAAGAAAGCTTAAAGAAGCACATTTCCGCGATGTTACAAATGTATCT
GTGGTGGGACTAACGCAAAAAGATGGCGTTTATATCACTATGCCAAATGGTAATACAATTGTTTCAAGCGAATGCAAACT
CCTTGTGATTGGCACAAGTGAAAATATTCGTGCTACCAAACGTTTGATTATGAAAAAGCAAAAACCAAGAGAGGTTGATT
ATGTTTGA

Upstream 100 bases:

>100_bases
TTCGACTTAAACTTGAAGATGGAACAAGCGTAAGAGTAAAAGTTGCCGCTTCCACATTGCGAACGATAAAAAAATATTCT
TAAACTGAGCTTTATCTATC

Downstream 100 bases:

>100_bases
GATTATTCCTATTAAAGGTGGTGTCAATGCGCCACAGGGATTCTACGCAGATGGTGTAAGTGCGGGATTAAAGCCTCCGC
TTCCTAATGGTGCTCCTGCA

Product: hypothetical protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK2 [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN
EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF
VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS
QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS
VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV

Sequences:

>Translated_375_residues
MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN
EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF
VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS
QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS
VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV
>Mature_375_residues
MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN
EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF
VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS
QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS
VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV

Specific function: Probable potassium channel protein [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 43060; Mature: 43060

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQ
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
AFFQTSYTFTNTGFGSLKENEFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRL
HHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEE
IKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPFVVVDNSPDFEVQAQKHKYPY
EHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCE
YIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS
EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCC
QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRY
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCHH
SWLVLRKLKEAHFRDVTNVSVVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATK
HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEECCCCHHHHH
RLIMKKQKPREVDYV
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQ
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
AFFQTSYTFTNTGFGSLKENEFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRL
HHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEE
IKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPFVVVDNSPDFEVQAQKHKYPY
EHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCE
YIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS
EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCC
QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRY
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCHH
SWLVLRKLKEAHFRDVTNVSVVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATK
HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEECCCCHHHHH
RLIMKKQKPREVDYV
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]