| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is kch [C]
Identifier: 32266789
GI number: 32266789
Start: 1250353
End: 1251480
Strand: Direct
Name: kch [C]
Synonym: HH1290
Alternate gene names: 32266789
Gene position: 1250353-1251480 (Clockwise)
Preceding gene: 32266788
Following gene: 32266790
Centisome position: 69.5
GC content: 36.7
Gene sequence:
>1128_bases TTGTTTGCAAGATTTAAGAAATTTCTTCACTGGGGCAATACCCCGAAACCAGACATTTCTTTAGCTGGTGAGCTCTACGA GCAGCTCAAACCCTTTAGACTTCCGCTTATTCTTGTTCAATTTTTTCTTCTTTTTGGCACATTAGGGTATTTAGCATTAG AAGATTATGATTTAATGCAGGCATTTTTTCAAACTTCTTATACTTTTACAAATACAGGATTTGGCTCATTAAAAGAAAAT GAATTTAGCACAATCACTATTTTTTTCACTGTTATTTTAATGGTGTGTGGAGCGGGAGTTGTAACTTTTAGCGTGGCATT TATTATGAGTGTGGTGAATAATGGCACTCTTATTAGATTAATTAAGGAGCAAAAAATGGTATATAAAATTGCGCGTTTGC AAAATCATTATGTGATTTGCTATCACAATGAATTTACTACTGAACTTGCCCAGCAGTTTTTAGAAGCTCATATTCCCTTT GTCGTGGTGGATAATTCTCCTGATTTTGAAGTCCAAGCCCAAAAGCATAAGTATCCTTATTACATTATTGATGACCCACA TACGCATATAGCTATGCTCAAATCTCACCTCTCAAGTGCAAAAGGTATCATAAGCTTTTCTAAGAATCCTGCGGATAATA TTACTATGGTGGTGAGTGCACGTATCTTTGAAGAAGAGCTAAGAAGAAAGCCTTATTATATTATCGCTAACGCTAATTCT CAAGAAGAGAGCAAAAAGCTTAAAAAAATAGGCTGTGATGCCGTAATTTCTGCCTCTAAGCTTATGGCACAGAGAATCTC TGCAATGGCAGTGCGTCCTGATATGGAGAATCTCCTTGAGCGGTTTTTATATCAACGTGATACGCCGCTTGATTTGGAAG AAATTATCGTGCCACGTTATTCGTGGCTTGTGCTAAGAAAGCTTAAAGAAGCACATTTCCGCGATGTTACAAATGTATCT GTGGTGGGACTAACGCAAAAAGATGGCGTTTATATCACTATGCCAAATGGTAATACAATTGTTTCAAGCGAATGCAAACT CCTTGTGATTGGCACAAGTGAAAATATTCGTGCTACCAAACGTTTGATTATGAAAAAGCAAAAACCAAGAGAGGTTGATT ATGTTTGA
Upstream 100 bases:
>100_bases TTCGACTTAAACTTGAAGATGGAACAAGCGTAAGAGTAAAAGTTGCCGCTTCCACATTGCGAACGATAAAAAAATATTCT TAAACTGAGCTTTATCTATC
Downstream 100 bases:
>100_bases GATTATTCCTATTAAAGGTGGTGTCAATGCGCCACAGGGATTCTACGCAGATGGTGTAAGTGCGGGATTAAAGCCTCCGC TTCCTAATGGTGCTCCTGCA
Product: hypothetical protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK2 [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV
Sequences:
>Translated_375_residues MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV >Mature_375_residues MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQAFFQTSYTFTNTGFGSLKEN EFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRLIKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPF VVVDNSPDFEVQAQKHKYPYYIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRYSWLVLRKLKEAHFRDVTNVS VVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATKRLIMKKQKPREVDYV
Specific function: Probable potassium channel protein [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 43060; Mature: 43060
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH AFFQTSYTFTNTGFGSLKENEFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRL HHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEE IKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPFVVVDNSPDFEVQAQKHKYPY EHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCE YIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCC QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCHH SWLVLRKLKEAHFRDVTNVSVVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATK HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEECCCCHHHHH RLIMKKQKPREVDYV HHHHHCCCCCCCCCC >Mature Secondary Structure MFARFKKFLHWGNTPKPDISLAGELYEQLKPFRLPLILVQFFLLFGTLGYLALEDYDLMQ CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH AFFQTSYTFTNTGFGSLKENEFSTITIFFTVILMVCGAGVVTFSVAFIMSVVNNGTLIRL HHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEE IKEQKMVYKIARLQNHYVICYHNEFTTELAQQFLEAHIPFVVVDNSPDFEVQAQKHKYPY EHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCE YIIDDPHTHIAMLKSHLSSAKGIISFSKNPADNITMVVSARIFEEELRRKPYYIIANANS EEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCC QEESKKLKKIGCDAVISASKLMAQRISAMAVRPDMENLLERFLYQRDTPLDLEEIIVPRY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCHH SWLVLRKLKEAHFRDVTNVSVVGLTQKDGVYITMPNGNTIVSSECKLLVIGTSENIRATK HHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEEEECCCEEEEEECCCCHHHHH RLIMKKQKPREVDYV HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]