| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266783
Identifier: 32266783
GI number: 32266783
Start: 1245405
End: 1245923
Strand: Direct
Name: 32266783
Synonym: HH1284
Alternate gene names: NA
Gene position: 1245405-1245923 (Clockwise)
Preceding gene: 32266782
Following gene: 32266784
Centisome position: 69.22
GC content: 36.03
Gene sequence:
>519_bases ATGAAAACAATTACTCTTTTGCGCCACGCCGATACAATAAGTAGGGAAGAATACCGACTCAACAATAAAAAAGATAAAAG TGATATTTTTCGTCCATTAAGTAAGCTTGGTAAAACTCAAAGTAAGCATATAGCGCATTTAGCTGCACAACATTTGCACT TTGATGTCATCTTTTGCTCACCTGCTAAACGCACACAGCAAACGCTTAAACCCTTAAGCAAATATGTGCGTTCGGATTCT ATAATTCTGTGTGATGAGATTCTTCCTGATTGCGGACTTGAGGGATATATGAAGCTTATAGAAAAAAAATCATTTCAAAA AGCACAAAATGCGCTTATTGTAGGACATCAACCTGATTTAAAGAGTTTTGCAACTTATCTTTGTCCTTCATTTCGTGCAC TTGTCCCTAAGGGCGTATTGATGAGGTTTATACTTCATTCTGGCAGCAATGGACTTGAAGGACAAGGTGTAATTGATTTT ATTTTGCCACCCTTTATGCTTGAAGATTTTAAAAAATAA
Upstream 100 bases:
>100_bases TAAGCTTTGATGAATTTTTGGTAAGCTCGGCAAAACGCAGTGCTGATTTTGTAATGATGATGTGTGAAATGATTTTAGCC CACAAATAAAGGAGCATTTT
Downstream 100 bases:
>100_bases GGAATAAGTATGAGATATGCTCACTATATACGCACAAAGCGTGGAGCATTTAGTATGATGGAGCTTGTATTTGTTATCAT TATACTTGGGATTCTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKTITLLRHADTISREEYRLNNKKDKSDIFRPLSKLGKTQSKHIAHLAAQHLHFDVIFCSPAKRTQQTLKPLSKYVRSDS IILCDEILPDCGLEGYMKLIEKKSFQKAQNALIVGHQPDLKSFATYLCPSFRALVPKGVLMRFILHSGSNGLEGQGVIDF ILPPFMLEDFKK
Sequences:
>Translated_172_residues MKTITLLRHADTISREEYRLNNKKDKSDIFRPLSKLGKTQSKHIAHLAAQHLHFDVIFCSPAKRTQQTLKPLSKYVRSDS IILCDEILPDCGLEGYMKLIEKKSFQKAQNALIVGHQPDLKSFATYLCPSFRALVPKGVLMRFILHSGSNGLEGQGVIDF ILPPFMLEDFKK >Mature_172_residues MKTITLLRHADTISREEYRLNNKKDKSDIFRPLSKLGKTQSKHIAHLAAQHLHFDVIFCSPAKRTQQTLKPLSKYVRSDS IILCDEILPDCGLEGYMKLIEKKSFQKAQNALIVGHQPDLKSFATYLCPSFRALVPKGVLMRFILHSGSNGLEGQGVIDF ILPPFMLEDFKK
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19555; Mature: 19555
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTITLLRHADTISREEYRLNNKKDKSDIFRPLSKLGKTQSKHIAHLAAQHLHFDVIFCS CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEC PAKRTQQTLKPLSKYVRSDSIILCDEILPDCGLEGYMKLIEKKSFQKAQNALIVGHQPDL CCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCH KSFATYLCPSFRALVPKGVLMRFILHSGSNGLEGQGVIDFILPPFMLEDFKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHCCC >Mature Secondary Structure MKTITLLRHADTISREEYRLNNKKDKSDIFRPLSKLGKTQSKHIAHLAAQHLHFDVIFCS CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEC PAKRTQQTLKPLSKYVRSDSIILCDEILPDCGLEGYMKLIEKKSFQKAQNALIVGHQPDL CCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCH KSFATYLCPSFRALVPKGVLMRFILHSGSNGLEGQGVIDFILPPFMLEDFKK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA