Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is fixP

Identifier: 32266758

GI number: 32266758

Start: 1222370

End: 1223242

Strand: Direct

Name: fixP

Synonym: HH1259

Alternate gene names: NA

Gene position: 1222370-1223242 (Clockwise)

Preceding gene: 32266757

Following gene: 32266759

Centisome position: 67.94

GC content: 37.57

Gene sequence:

>873_bases
ATGAATTGGTCAGATAATATAACAACACTAGGTTTGTTAGGTGCTTTTGTTATCTTAATACTTACTATTTTTATAATAGG
GGTATATCTTAAAAAGATTAAAGATGGCAAAGCTGAAGGAGAATTGACAAGTGAGAGCTGGGATGGTATTGGTGAGCAGA
CGAATAATCTTCCTGTTGGTTGGGCTGCCTGCTTTTTAGGTGTGCTTATTTGGGGTTTTTGGTATATCTTTTTAGGATAT
CCACTTAATGCTTATTCGCAGATTGGAGAATATAACCAAGAAGTCCAAAGTTATAATCAAAAATATGCTTCTACTTGGGA
AAATTTAAGTGGAGAGGAACTTGGTAGTATGGGACAAAGTATTTTTTTAGTGCAATGTTCTCAATGCCACGGCATCACAG
CAGAAGGTATGAATGGTAAGGCAGAAAACCTTACAAAATGGGGTAAAGAAGAGGGCATTATTAAAGTTATTAAAGAAGGA
AGTAAAGGCTTAGATTATATGGCTGGCGAAATGGTGCCTGTAGCAGTAAGCGATAGCGAAGCAAAAGCAATAGCAGCTTA
TGTTATGCAAGATATTTCAAATACGAAAAGCACCAAATATCCGCTTGAGGTAAGTAAAGGCAAAGAGCTTTTTGCAATAC
ATTGTGCAGCTTGTCACGGAGATGAAGGCAAGGGTAATGGAGGTGGTGTAGATGGATTTGCACCTGATCTTAGCCAATAT
GGCACATCGCACTTTTTAGCAGAAGTGCTTGCAAAAGGCAAAAAAGGTATAATTGGTGTTATGCCTTCGTTTGAATATGC
TAATTTTGCGCCAAGCCAAAAAGAGGCGCTTAATGTATATATTCGCTCTTTAGAATCATCTGAAGCTGAATAA

Upstream 100 bases:

>100_bases
AAGGTGTAAAGGATTATGAAAAATATGCTAATCTTGCTCTTAATGATAATCTTGATGATGAGCCCATTGAACCACGAATA
AAAAATGAAAGGGGAACTAG

Downstream 100 bases:

>100_bases
AGGAGATTGTAATGAATGGTTTATTTGGACTTAATGGTTTAACAGGGTTTATTATCGCTGTAGTGCTTTTGCTTAGCATT
GTTGCAGGTTTGGGCACTTG

Product: cb-type cytochrome C oxidase subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit CcoP; FixP2 Diheme C-Type Cytochrome; CB-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome-C Oxidase Subunit III; Cytochrome C Oxidase Diheme Subunit; Cytochrome-C Oxidase FixP Chain; Cbb3 Oxidase Subunit III

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY
PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG
SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY
GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE

Sequences:

>Translated_290_residues
MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY
PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG
SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY
GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE
>Mature_290_residues
MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVGWAACFLGVLIWGFWYIFLGY
PLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQSIFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEG
SKGLDYMAGEMVPVAVSDSEAKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY
GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 31452; Mature: 31452

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH
WAACFLGVLIWGFWYIFLGYPLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
IFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEGSKGLDYMAGEMVPVAVSDSE
EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCH
AKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY
HHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNWSDNITTLGLLGAFVILILTIFIIGVYLKKIKDGKAEGELTSESWDGIGEQTNNLPVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHH
WAACFLGVLIWGFWYIFLGYPLNAYSQIGEYNQEVQSYNQKYASTWENLSGEELGSMGQS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
IFLVQCSQCHGITAEGMNGKAENLTKWGKEEGIIKVIKEGSKGLDYMAGEMVPVAVSDSE
EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEECCCH
AKAIAAYVMQDISNTKSTKYPLEVSKGKELFAIHCAACHGDEGKGNGGGVDGFAPDLSQY
HHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH
GTSHFLAEVLAKGKKGIIGVMPSFEYANFAPSQKEALNVYIRSLESSEAE
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA