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The map label for this gene is yibQ [H]

Identifier: 32266725

GI number: 32266725

Start: 1193051

End: 1193920

Strand: Direct

Name: yibQ [H]

Synonym: HH1226

Alternate gene names: 32266725

Gene position: 1193051-1193920 (Clockwise)

Preceding gene: 32266723

Following gene: 32266726

Centisome position: 66.31

GC content: 36.55

Gene sequence:

>870_bases
ATGCAACACCCTATTATACAGGGCTTTAATAAAGCATTTTCGCAACTTCATTCAGATAATTTTATCAATCTTGATTCTAA
AGCGCATTCTTTAGATATTCCACCTCTAAAACAACAAGATTCTCAATTTTTAAATACACCCTCTATGCCTCAAAGTGCTG
CGAAGCCAAAAGTGCTTCTTATTATGGATGACCTTTCTACGCTTGCACAAATTAAACATTTAGAGTATCTCAAGCTTAAT
ATAACACCCTCTATTTTTCCAAAGACAAAACATAATCCCTCTACGCCACATCTTGCGGAACTCGTGCTTAAAAATGGTAA
AAGTTTTATGATTCATCTTCCCCTTGAAGCACAGCATTTTATACAAAAAGAGCTAGAGCCTATAAAAGTGGGTGCAAGTA
GAGAATCTATCAAGCAAGATATTTTGGCGATTAAAAATGATTTTCCTCAGCTTGTATATCTCAATAACCATACAGGGAGT
AAATTCACCCAAAGCAAAGCTGATATGACTAATCTTCTAAGTGTGTTTGATGAGCTGGGATTGAAGTTTATTGATAGCGT
TACGACTTCATACCCTGCAAGCGAAAGTATCGCTAGAGAACAAAAGCGGCTTATTATGGCACGTGATATTTTTTTAGATA
ATCAAAGTGATGTCGCCTATACTAAAGCTCAACTTAAATCTTTGATTAAAAAGGCACAAAAAAAGGGCTATGCAATTGCT
ATTTGCCACCCTCACTCTACCACTTTTAGAGCATTAGCCCAAATGAGAGATGAGATTAATTCTACCTTAGAGCTTATTTC
ACCCCAAGAGCTAGAATCTTATCTTTCCGCGCATACCAATCAGTATGTTCGCTCGCCATTTACGCCATAA

Upstream 100 bases:

>100_bases
TTTTATATGTATATACCATATAAATGTGTGGGCAGATTCTATTATCACTTCGCTACAAGATAAATCAGCATCTACACAAA
GCACGCAGCAGCACGTCTCA

Downstream 100 bases:

>100_bases
AGTTACACAATGATTGCTGATATTTTATCCCTTAGAAGTTTGCCAAAAGCCTTTGAAATACTGCCAAATCCACCAAAAAA
GCTTTTTTATTGTGGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQHPIIQGFNKAFSQLHSDNFINLDSKAHSLDIPPLKQQDSQFLNTPSMPQSAAKPKVLLIMDDLSTLAQIKHLEYLKLN
ITPSIFPKTKHNPSTPHLAELVLKNGKSFMIHLPLEAQHFIQKELEPIKVGASRESIKQDILAIKNDFPQLVYLNNHTGS
KFTQSKADMTNLLSVFDELGLKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKAQLKSLIKKAQKKGYAIA
ICHPHSTTFRALAQMRDEINSTLELISPQELESYLSAHTNQYVRSPFTP

Sequences:

>Translated_289_residues
MQHPIIQGFNKAFSQLHSDNFINLDSKAHSLDIPPLKQQDSQFLNTPSMPQSAAKPKVLLIMDDLSTLAQIKHLEYLKLN
ITPSIFPKTKHNPSTPHLAELVLKNGKSFMIHLPLEAQHFIQKELEPIKVGASRESIKQDILAIKNDFPQLVYLNNHTGS
KFTQSKADMTNLLSVFDELGLKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKAQLKSLIKKAQKKGYAIA
ICHPHSTTFRALAQMRDEINSTLELISPQELESYLSAHTNQYVRSPFTP
>Mature_289_residues
MQHPIIQGFNKAFSQLHSDNFINLDSKAHSLDIPPLKQQDSQFLNTPSMPQSAAKPKVLLIMDDLSTLAQIKHLEYLKLN
ITPSIFPKTKHNPSTPHLAELVLKNGKSFMIHLPLEAQHFIQKELEPIKVGASRESIKQDILAIKNDFPQLVYLNNHTGS
KFTQSKADMTNLLSVFDELGLKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKAQLKSLIKKAQKKGYAIA
ICHPHSTTFRALAQMRDEINSTLELISPQELESYLSAHTNQYVRSPFTP

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=166, Percent_Identity=31.3253012048193, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 32633; Mature: 32633

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHPIIQGFNKAFSQLHSDNFINLDSKAHSLDIPPLKQQDSQFLNTPSMPQSAAKPKVLL
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCEEEE
IMDDLSTLAQIKHLEYLKLNITPSIFPKTKHNPSTPHLAELVLKNGKSFMIHLPLEAQHF
EECCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHH
IQKELEPIKVGASRESIKQDILAIKNDFPQLVYLNNHTGSKFTQSKADMTNLLSVFDELG
HHHCCCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKAQLKSLIKKAQKKGYAIA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
ICHPHSTTFRALAQMRDEINSTLELISPQELESYLSAHTNQYVRSPFTP
EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQHPIIQGFNKAFSQLHSDNFINLDSKAHSLDIPPLKQQDSQFLNTPSMPQSAAKPKVLL
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHCCCEEEE
IMDDLSTLAQIKHLEYLKLNITPSIFPKTKHNPSTPHLAELVLKNGKSFMIHLPLEAQHF
EECCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHH
IQKELEPIKVGASRESIKQDILAIKNDFPQLVYLNNHTGSKFTQSKADMTNLLSVFDELG
HHHCCCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LKFIDSVTTSYPASESIAREQKRLIMARDIFLDNQSDVAYTKAQLKSLIKKAQKKGYAIA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEE
ICHPHSTTFRALAQMRDEINSTLELISPQELESYLSAHTNQYVRSPFTP
EECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]