| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
Click here to switch to the map view.
The map label for this gene is eptA [H]
Identifier: 32266664
GI number: 32266664
Start: 1129745
End: 1132216
Strand: Direct
Name: eptA [H]
Synonym: HH1165
Alternate gene names: 32266664
Gene position: 1129745-1132216 (Clockwise)
Preceding gene: 32266663
Following gene: 32266665
Centisome position: 62.79
GC content: 39.97
Gene sequence:
>2472_bases ATGATCAAATTGCACCAAAGACAAATGACAATAAAACTACACAAATTCATTGATAATTTGTGTATAATCACAGCTATGAA TAAACAAGTTAGTATGAATTTTGCCAAAGTGAATTTATGGCATTTAGGTGTCACAATAGGCATTTTTTGCCTTATTGTTG GTATGTTAAGAATCTTTGGTTGGAGTGAGCCGGAGGTATATCCACAGATTCAAAAGGATATTTTCTTAGCCATCAATTCG CTTTGGTCCAATGTCCCATCTCTCGCACACAATCTTACCCAACTCGGTGATGCAAGTGTAGCATTCGCACTCTTGCTAGG GTTCCTCATCGCACCTAAGCTTTGGGAAGCACTCATCGCAGGCTCCTTGCTTTCTCTTGTGCTTTCTACATTATTCAAGA CAATCTATGCAATGCCACGTCCAGCACGTGCTTTTGAGAATACTTTTAATATCATCGGTGAGCGACTAGCAGGCACAAAT AGCCTACCATCAGGGCATTCGATCACTATATTCACGATACTTTCTGTGCTGCTTTTTGCTTTTATGCCAAGCACTCGCAA ATGGCGTTTGCCTTTTATCATAGGTATCACTCTTTTGGGTGTATTTGTGGGGCTTTCACGCGTGGGCGTGGGAGCACACT ATCCGCTAGATGTCCTTGTGGGCGCGTCCCTTGGGTGTGTGTGCGGAGTCTTTGGTGTGCTTGTGGCTAGTAAGACGCGT ATTTTTGCTTGGTTAGATTCACATTTTGGTTTGCTTATTTTCGCTACTTTGGGCGCAGTTGCTGTGGTGATGGCGATTCA AAATATCAGTAAGCATAATCTTGCGGTATTTTATCTTGCACTTATTTGTGCGTCAGGCTGCTTATTTATGATGCTACATA AATATTTTACTAGCGCTCAAAGATTGGATTTACAATGCACCACTCCACCCCCCCCCCCCCCCCACCCCACCCCGAGTCAA CCTATCGTCTTTATTTTCATCATCTCCGCACTTCAAGTAGCATTTTTCCATTTTCCTTTTTTAGGATTCGTGCGGACAAA TCTCGCTTTAGATTCACTAAATGCAATTGTGCTATTTGTTTCACTCGTGCTATTTTTGTTCGCACTTACTACACTTATGC CACTCTTATTAGCGCTCATCTCTTTCAAGCTCACTAAAATATGGTTCGCAATTATCTCAATCACAAATGCCATAGCGGTG TATTTCGTCTCTGTATATGGAGTGTTTTTGGATAAAACGATGATGGGCAATCTCTTTAATACAAACCCAGCAGAAGCAGG AGAATTTCTATCTTTAAAAATGGCACTATATATAGTTATACTAGGTCTTCTCCCAGCATGCTTTCTACTCTTTGAAAAGG TGGCAAGACCTACACGCAAATCACTTGCTAAGAGCTTAGGCTTGATATTTTTCGTGCTTATTGTGCTTACTGGAGTTAAT TTTCAGAATCTATTGTGGTTTGATAAATACTCTAAACAACTTGGCGCACTTATTATGCCTTGGTCATATATAGGTAACTC AGTGCGGTATTTTCAAGGGGAGTTAGCAAAAAATAAAAAAGAGATTCCCCTCCCTGATGCACGCATTACAAATGACAAAA AATCTGTAGTCGTGCTGGTGATTGGTGAATCTGCACGTGCAAAAAACTTCTCATTATATGGTTACTCACGCAATACCAAC CCTCTCCTTTTAGAAGTGTCAGGACTTCGACATTTTTATGCAAAATCAAGCACGACATATACGAGTGCATCTGTGAAAAA TATGCTTTCATACAAGGATAGCACAAATCTGTATGAGATATTGCCAAACTATCTTGCACGCACTGGGGTAGATGTGATGT GGCGTTCGACAAATTGGGGTGAACCCCCGCTTCACCTACCTAGTGAAAATATTATGCGATATTCGCAACTTGCAGAGAAA TATATTCATCTTGATGATAACTATGAGTCTACACTTGTGGCGGGACTAACCGAGGACATTGAGTTAGCAAAATCGCCTAA AGTGCTTATCGTCATTCATACAAGCACGAGCCACGGACCAACATATTATAAGAAATACCCTCCTCAGTTTGAAGTCTTTA AGCCTGTGTGTAAAAGTGTCGAACCAAAGGGATGCTTACAGAGTGAAATTATCAATGCGTATGATAATACAATCCTCTAT ACTGATTTTTTATTGCACTCAGTCATTAGTCAGTTAAGCAAACTTGATAAATACGACAGCACAATGATTTATGTAAGTGA TCACGGCGAGAGCTTGGGTGAAAATGGTGTATATATGCACGGGATACCATTAGCATTTGCACCAAAGGAGCAATATGAAA TACCATTTTTTGTGTGGAGTTCTAATGCTAGCAGGATTAAAGATTTAAATGAAGCAACACACTTTCATATCTTTCATAGT GTTTTGACATTTTTAGATGTGGAGAGCGAAGTGCTTGATGAAAAAATGAGCATATTTACTAAGCAAAAATAG
Upstream 100 bases:
>100_bases TTAGCTCTTGAAGCAAAGATACAAGATAAATATATTTTCTAGCTTGCTGAAGGTCTAGGTTAGAATCTAAGCAAGGGCAT TTAGATTCTTATAGAATTTA
Downstream 100 bases:
>100_bases CAAATTACTAGCGTTTGTATAATTTTTGCATTTTTGGTAAAAATTCCCACACACATAAGATAAATATAAAATCAACAATG CGCAATAATACTTTGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MIKLHQRQMTIKLHKFIDNLCIITAMNKQVSMNFAKVNLWHLGVTIGIFCLIVGMLRIFGWSEPEVYPQIQKDIFLAINS LWSNVPSLAHNLTQLGDASVAFALLLGFLIAPKLWEALIAGSLLSLVLSTLFKTIYAMPRPARAFENTFNIIGERLAGTN SLPSGHSITIFTILSVLLFAFMPSTRKWRLPFIIGITLLGVFVGLSRVGVGAHYPLDVLVGASLGCVCGVFGVLVASKTR IFAWLDSHFGLLIFATLGAVAVVMAIQNISKHNLAVFYLALICASGCLFMMLHKYFTSAQRLDLQCTTPPPPPPHPTPSQ PIVFIFIISALQVAFFHFPFLGFVRTNLALDSLNAIVLFVSLVLFLFALTTLMPLLLALISFKLTKIWFAIISITNAIAV YFVSVYGVFLDKTMMGNLFNTNPAEAGEFLSLKMALYIVILGLLPACFLLFEKVARPTRKSLAKSLGLIFFVLIVLTGVN FQNLLWFDKYSKQLGALIMPWSYIGNSVRYFQGELAKNKKEIPLPDARITNDKKSVVVLVIGESARAKNFSLYGYSRNTN PLLLEVSGLRHFYAKSSTTYTSASVKNMLSYKDSTNLYEILPNYLARTGVDVMWRSTNWGEPPLHLPSENIMRYSQLAEK YIHLDDNYESTLVAGLTEDIELAKSPKVLIVIHTSTSHGPTYYKKYPPQFEVFKPVCKSVEPKGCLQSEIINAYDNTILY TDFLLHSVISQLSKLDKYDSTMIYVSDHGESLGENGVYMHGIPLAFAPKEQYEIPFFVWSSNASRIKDLNEATHFHIFHS VLTFLDVESEVLDEKMSIFTKQK
Sequences:
>Translated_823_residues MIKLHQRQMTIKLHKFIDNLCIITAMNKQVSMNFAKVNLWHLGVTIGIFCLIVGMLRIFGWSEPEVYPQIQKDIFLAINS LWSNVPSLAHNLTQLGDASVAFALLLGFLIAPKLWEALIAGSLLSLVLSTLFKTIYAMPRPARAFENTFNIIGERLAGTN SLPSGHSITIFTILSVLLFAFMPSTRKWRLPFIIGITLLGVFVGLSRVGVGAHYPLDVLVGASLGCVCGVFGVLVASKTR IFAWLDSHFGLLIFATLGAVAVVMAIQNISKHNLAVFYLALICASGCLFMMLHKYFTSAQRLDLQCTTPPPPPPHPTPSQ PIVFIFIISALQVAFFHFPFLGFVRTNLALDSLNAIVLFVSLVLFLFALTTLMPLLLALISFKLTKIWFAIISITNAIAV YFVSVYGVFLDKTMMGNLFNTNPAEAGEFLSLKMALYIVILGLLPACFLLFEKVARPTRKSLAKSLGLIFFVLIVLTGVN FQNLLWFDKYSKQLGALIMPWSYIGNSVRYFQGELAKNKKEIPLPDARITNDKKSVVVLVIGESARAKNFSLYGYSRNTN PLLLEVSGLRHFYAKSSTTYTSASVKNMLSYKDSTNLYEILPNYLARTGVDVMWRSTNWGEPPLHLPSENIMRYSQLAEK YIHLDDNYESTLVAGLTEDIELAKSPKVLIVIHTSTSHGPTYYKKYPPQFEVFKPVCKSVEPKGCLQSEIINAYDNTILY TDFLLHSVISQLSKLDKYDSTMIYVSDHGESLGENGVYMHGIPLAFAPKEQYEIPFFVWSSNASRIKDLNEATHFHIFHS VLTFLDVESEVLDEKMSIFTKQK >Mature_823_residues MIKLHQRQMTIKLHKFIDNLCIITAMNKQVSMNFAKVNLWHLGVTIGIFCLIVGMLRIFGWSEPEVYPQIQKDIFLAINS LWSNVPSLAHNLTQLGDASVAFALLLGFLIAPKLWEALIAGSLLSLVLSTLFKTIYAMPRPARAFENTFNIIGERLAGTN SLPSGHSITIFTILSVLLFAFMPSTRKWRLPFIIGITLLGVFVGLSRVGVGAHYPLDVLVGASLGCVCGVFGVLVASKTR IFAWLDSHFGLLIFATLGAVAVVMAIQNISKHNLAVFYLALICASGCLFMMLHKYFTSAQRLDLQCTTPPPPPPHPTPSQ PIVFIFIISALQVAFFHFPFLGFVRTNLALDSLNAIVLFVSLVLFLFALTTLMPLLLALISFKLTKIWFAIISITNAIAV YFVSVYGVFLDKTMMGNLFNTNPAEAGEFLSLKMALYIVILGLLPACFLLFEKVARPTRKSLAKSLGLIFFVLIVLTGVN FQNLLWFDKYSKQLGALIMPWSYIGNSVRYFQGELAKNKKEIPLPDARITNDKKSVVVLVIGESARAKNFSLYGYSRNTN PLLLEVSGLRHFYAKSSTTYTSASVKNMLSYKDSTNLYEILPNYLARTGVDVMWRSTNWGEPPLHLPSENIMRYSQLAEK YIHLDDNYESTLVAGLTEDIELAKSPKVLIVIHTSTSHGPTYYKKYPPQFEVFKPVCKSVEPKGCLQSEIINAYDNTILY TDFLLHSVISQLSKLDKYDSTMIYVSDHGESLGENGVYMHGIPLAFAPKEQYEIPFFVWSSNASRIKDLNEATHFHIFHS VLTFLDVESEVLDEKMSIFTKQK
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=483, Percent_Identity=31.4699792960663, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI87082286, Length=265, Percent_Identity=30.188679245283, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790392, Length=517, Percent_Identity=25.1450676982592, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI87082223, Length=311, Percent_Identity=28.6173633440514, Blast_Score=83, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 92069; Mature: 92069
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLHQRQMTIKLHKFIDNLCIITAMNKQVSMNFAKVNLWHLGVTIGIFCLIVGMLRIFG CCEECHHHHHHHHHHHHCCCEEEEECCCHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC WSEPEVYPQIQKDIFLAINSLWSNVPSLAHNLTQLGDASVAFALLLGFLIAPKLWEALIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GSLLSLVLSTLFKTIYAMPRPARAFENTFNIIGERLAGTNSLPSGHSITIFTILSVLLFA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FMPSTRKWRLPFIIGITLLGVFVGLSRVGVGAHYPLDVLVGASLGCVCGVFGVLVASKTR HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHH IFAWLDSHFGLLIFATLGAVAVVMAIQNISKHNLAVFYLALICASGCLFMMLHKYFTSAQ HEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RLDLQCTTPPPPPPHPTPSQPIVFIFIISALQVAFFHFPFLGFVRTNLALDSLNAIVLFV HEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLFLFALTTLMPLLLALISFKLTKIWFAIISITNAIAVYFVSVYGVFLDKTMMGNLFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNPAEAGEFLSLKMALYIVILGLLPACFLLFEKVARPTRKSLAKSLGLIFFVLIVLTGVN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC FQNLLWFDKYSKQLGALIMPWSYIGNSVRYFQGELAKNKKEIPLPDARITNDKKSVVVLV HHHHHHHHHHHHHHCCEEECHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE IGESARAKNFSLYGYSRNTNPLLLEVSGLRHFYAKSSTTYTSASVKNMLSYKDSTNLYEI ECCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH LPNYLARTGVDVMWRSTNWGEPPLHLPSENIMRYSQLAEKYIHLDDNYESTLVAGLTEDI HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH ELAKSPKVLIVIHTSTSHGPTYYKKYPPQFEVFKPVCKSVEPKGCLQSEIINAYDNTILY HHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHH TDFLLHSVISQLSKLDKYDSTMIYVSDHGESLGENGVYMHGIPLAFAPKEQYEIPFFVWS HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEEECCCCCCCCCEEEEC SNASRIKDLNEATHFHIFHSVLTFLDVESEVLDEKMSIFTKQK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKLHQRQMTIKLHKFIDNLCIITAMNKQVSMNFAKVNLWHLGVTIGIFCLIVGMLRIFG CCEECHHHHHHHHHHHHCCCEEEEECCCHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC WSEPEVYPQIQKDIFLAINSLWSNVPSLAHNLTQLGDASVAFALLLGFLIAPKLWEALIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GSLLSLVLSTLFKTIYAMPRPARAFENTFNIIGERLAGTNSLPSGHSITIFTILSVLLFA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH FMPSTRKWRLPFIIGITLLGVFVGLSRVGVGAHYPLDVLVGASLGCVCGVFGVLVASKTR HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHH IFAWLDSHFGLLIFATLGAVAVVMAIQNISKHNLAVFYLALICASGCLFMMLHKYFTSAQ HEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH RLDLQCTTPPPPPPHPTPSQPIVFIFIISALQVAFFHFPFLGFVRTNLALDSLNAIVLFV HEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLFLFALTTLMPLLLALISFKLTKIWFAIISITNAIAVYFVSVYGVFLDKTMMGNLFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNPAEAGEFLSLKMALYIVILGLLPACFLLFEKVARPTRKSLAKSLGLIFFVLIVLTGVN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC FQNLLWFDKYSKQLGALIMPWSYIGNSVRYFQGELAKNKKEIPLPDARITNDKKSVVVLV HHHHHHHHHHHHHHCCEEECHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE IGESARAKNFSLYGYSRNTNPLLLEVSGLRHFYAKSSTTYTSASVKNMLSYKDSTNLYEI ECCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHH LPNYLARTGVDVMWRSTNWGEPPLHLPSENIMRYSQLAEKYIHLDDNYESTLVAGLTEDI HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH ELAKSPKVLIVIHTSTSHGPTYYKKYPPQFEVFKPVCKSVEPKGCLQSEIINAYDNTILY HHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHH TDFLLHSVISQLSKLDKYDSTMIYVSDHGESLGENGVYMHGIPLAFAPKEQYEIPFFVWS HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEEECCCCCCCCCEEEEC SNASRIKDLNEATHFHIFHSVLTFLDVESEVLDEKMSIFTKQK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]