| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is tal
Identifier: 32266639
GI number: 32266639
Start: 1106917
End: 1107765
Strand: Direct
Name: tal
Synonym: HH1140
Alternate gene names: 32266639
Gene position: 1106917-1107765 (Clockwise)
Preceding gene: 32266638
Following gene: 32266641
Centisome position: 61.52
GC content: 36.04
Gene sequence:
>849_bases GTGTATCAAAATGCTATTGCTAAATTAAAGGGGAAAAATCCAAAAGAAATTTATGAACATCTTGCTCTTGAAGATATTCA CCGGGCAGCACAGATACTTAAATATTTGTGGGAGAGTAATCCGACGCAAGGTTTTATTAGTCTTGAAATTGACCCACTTT TGTGTGATGATGTTGCACAAAGCGTAGATGAAGGCGTGAGATTGTATCATAGTATTGCTATGCCAAATGTGATGATAAAA GTGCCAGCTACTTTTGCAGGATATGAAATAATGAATGCGCTTGCCACAAAAGGGATAAATATAAATGCGACTTTGGTTTT TACTCCCTCTCAAGCAAAAGAATGTGCATTAGCATTACAAGAGGGTTTTAAAAAAGCGCAAGATTCTCATTTAGAGCATT CTAACTTGCTTCAAGGCGTAATAAGTGTATTTGTTTCACGTTTTGATAGGGTAGTTGATGAACATATAGTGCAATCGCAT TTGTGCTCACAAGTGGGTATTATGAATGCAATGGATTGTTATGAAGTGATTGAGCAATATAATGTGTCCCATATCCGCAC ACTTTTTGCCTCAACGGGTGTAAAGGGTGAAGATTTGCCAAAAAGTTATTATATTGACAAACTTATTTTGCCTCATAGTA TCAATACTGCCCCACTTGAAAGTATTAGAGCTTATCAGATGAGTGAGGATAAAGAACAAAAATCATTAATTAATATATCT TCACGCTTGGCATTTTGGGAGGATATGAAAGAGAAAAATATCCATCGTGACATTATCGCTCATCGCCTTTTAGATGAGGG GCTTGTGGCATTTAAGCAAAGTTTTGAAGATTTGCTTAAATCACTTTAG
Upstream 100 bases:
>100_bases AGATTTCTTAGAAAATGAGTTTAGCAAACTCGTAGATTCAGGGCTAATAAATGGAGCCACAAGCAATCCAAGTATTTTCG CTCAAGCTCTTAAGAGTCCT
Downstream 100 bases:
>100_bases TTTTTGTCATTTATTTATTACGCTCATAAACAAATGGCACACTTTTAATGCCTGCATCTATCACCTTTTGATTTATCTTC ATTGTATCTTTTATATCAAT
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MYQNAIAKLKGKNPKEIYEHLALEDIHRAAQILKYLWESNPTQGFISLEIDPLLCDDVAQSVDEGVRLYHSIAMPNVMIK VPATFAGYEIMNALATKGININATLVFTPSQAKECALALQEGFKKAQDSHLEHSNLLQGVISVFVSRFDRVVDEHIVQSH LCSQVGIMNAMDCYEVIEQYNVSHIRTLFASTGVKGEDLPKSYYIDKLILPHSINTAPLESIRAYQMSEDKEQKSLINIS SRLAFWEDMKEKNIHRDIIAHRLLDEGLVAFKQSFEDLLKSL
Sequences:
>Translated_282_residues MYQNAIAKLKGKNPKEIYEHLALEDIHRAAQILKYLWESNPTQGFISLEIDPLLCDDVAQSVDEGVRLYHSIAMPNVMIK VPATFAGYEIMNALATKGININATLVFTPSQAKECALALQEGFKKAQDSHLEHSNLLQGVISVFVSRFDRVVDEHIVQSH LCSQVGIMNAMDCYEVIEQYNVSHIRTLFASTGVKGEDLPKSYYIDKLILPHSINTAPLESIRAYQMSEDKEQKSLINIS SRLAFWEDMKEKNIHRDIIAHRLLDEGLVAFKQSFEDLLKSL >Mature_282_residues MYQNAIAKLKGKNPKEIYEHLALEDIHRAAQILKYLWESNPTQGFISLEIDPLLCDDVAQSVDEGVRLYHSIAMPNVMIK VPATFAGYEIMNALATKGININATLVFTPSQAKECALALQEGFKKAQDSHLEHSNLLQGVISVFVSRFDRVVDEHIVQSH LCSQVGIMNAMDCYEVIEQYNVSHIRTLFASTGVKGEDLPKSYYIDKLILPHSINTAPLESIRAYQMSEDKEQKSLINIS SRLAFWEDMKEKNIHRDIIAHRLLDEGLVAFKQSFEDLLKSL
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004732 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 31906; Mature: 31906
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQNAIAKLKGKNPKEIYEHLALEDIHRAAQILKYLWESNPTQGFISLEIDPLLCDDVAQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH SVDEGVRLYHSIAMPNVMIKVPATFAGYEIMNALATKGININATLVFTPSQAKECALALQ HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH EGFKKAQDSHLEHSNLLQGVISVFVSRFDRVVDEHIVQSHLCSQVGIMNAMDCYEVIEQY HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVSHIRTLFASTGVKGEDLPKSYYIDKLILPHSINTAPLESIRAYQMSEDKEQKSLINIS CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SRLAFWEDMKEKNIHRDIIAHRLLDEGLVAFKQSFEDLLKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MYQNAIAKLKGKNPKEIYEHLALEDIHRAAQILKYLWESNPTQGFISLEIDPLLCDDVAQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH SVDEGVRLYHSIAMPNVMIKVPATFAGYEIMNALATKGININATLVFTPSQAKECALALQ HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH EGFKKAQDSHLEHSNLLQGVISVFVSRFDRVVDEHIVQSHLCSQVGIMNAMDCYEVIEQY HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVSHIRTLFASTGVKGEDLPKSYYIDKLILPHSINTAPLESIRAYQMSEDKEQKSLINIS CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SRLAFWEDMKEKNIHRDIIAHRLLDEGLVAFKQSFEDLLKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA