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The map label for this gene is 32266561

Identifier: 32266561

GI number: 32266561

Start: 1034767

End: 1035177

Strand: Direct

Name: 32266561

Synonym: HH1062

Alternate gene names: NA

Gene position: 1034767-1035177 (Clockwise)

Preceding gene: 32266560

Following gene: 32266562

Centisome position: 57.51

GC content: 41.12

Gene sequence:

>411_bases
ATGCGCTACTTCATCGGCATAGCATCAAAAAATCATATTCAAATAGGACAAGCAGGGGGATTTTGCCAACTCTGCCACGG
CAAAGCCGCACCGCTTAAAAGAATGAAGCAAAATGATAAAATCATCTATTATAGCCCTAAGCTTACTATGGAATCTAAAG
AGCCTTATCAAGCCTTCACTGCACTAGGTGAAATCGCAGATGAAAATGTGTATCAAGTGGAGATGTTTAAGGGATTTTTC
CCTTTTAGGCGCAATGTGCTATGGAGTGAAATTAAGCGAGAATGCCCTTTAAACGTGGCAAAGACACACCCAGAATGGAA
AGCCTACGCAAGCAAACTGCGTTTTGGGCATTTTGAAGTCTCCAAAGAGTTTTTTAACTTCCTCGCAGAGTATATGACAC
AGGATTCTTAA

Upstream 100 bases:

>100_bases
CGAAGATACCATAAGGGATAGGACACAGAGATTAACACAAGAATTTTTCAAAATTTGGAATGTTGATATTTTCACTAAAT
AATTAAAATAAGGACACCCA

Downstream 100 bases:

>100_bases
TGCAAAATACAATCTGCCAAAACTGCGGTATGCCTATCACTTCAAAGGAGCAATTCAATGCGCACTGCACTAAAATTTTC
CCAACACTAAAAAGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRYFIGIASKNHIQIGQAGGFCQLCHGKAAPLKRMKQNDKIIYYSPKLTMESKEPYQAFTALGEIADENVYQVEMFKGFF
PFRRNVLWSEIKRECPLNVAKTHPEWKAYASKLRFGHFEVSKEFFNFLAEYMTQDS

Sequences:

>Translated_136_residues
MRYFIGIASKNHIQIGQAGGFCQLCHGKAAPLKRMKQNDKIIYYSPKLTMESKEPYQAFTALGEIADENVYQVEMFKGFF
PFRRNVLWSEIKRECPLNVAKTHPEWKAYASKLRFGHFEVSKEFFNFLAEYMTQDS
>Mature_136_residues
MRYFIGIASKNHIQIGQAGGFCQLCHGKAAPLKRMKQNDKIIYYSPKLTMESKEPYQAFTALGEIADENVYQVEMFKGFF
PFRRNVLWSEIKRECPLNVAKTHPEWKAYASKLRFGHFEVSKEFFNFLAEYMTQDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0310 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1062_HELHP (Q7VHA5)

Other databases:

- EMBL:   AE017125
- RefSeq:   NP_860593.1
- ProteinModelPortal:   Q7VHA5
- GeneID:   1492751
- GenomeReviews:   AE017125_GR
- KEGG:   hhe:HH1062
- NMPDR:   fig|235279.1.peg.1062
- HOGENOM:   HBG418132
- OMA:   GHFEVSK
- ProtClustDB:   PRK02268
- BioCyc:   HHEP235279:HH_1062-MONOMER
- HAMAP:   MF_00771
- InterPro:   IPR002740
- InterPro:   IPR015947
- InterPro:   IPR022996

Pfam domain/function: PF01878 DUF55; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 15905; Mature: 15905

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFIGIASKNHIQIGQAGGFCQLCHGKAAPLKRMKQNDKIIYYSPKLTMESKEPYQAFT
CCEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHCCCCEEEECCCEEECCCCHHHHHH
ALGEIADENVYQVEMFKGFFPFRRNVLWSEIKRECPLNVAKTHPEWKAYASKLRFGHFEV
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
SKEFFNFLAEYMTQDS
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRYFIGIASKNHIQIGQAGGFCQLCHGKAAPLKRMKQNDKIIYYSPKLTMESKEPYQAFT
CCEEEEECCCCEEEECCCCCEEEECCCCCHHHHHHHCCCCEEEECCCEEECCCCHHHHHH
ALGEIADENVYQVEMFKGFFPFRRNVLWSEIKRECPLNVAKTHPEWKAYASKLRFGHFEV
HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
SKEFFNFLAEYMTQDS
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954