Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32266560

Identifier: 32266560

GI number: 32266560

Start: 1032985

End: 1034748

Strand: Direct

Name: 32266560

Synonym: HH1061

Alternate gene names: NA

Gene position: 1032985-1034748 (Clockwise)

Preceding gene: 32266559

Following gene: 32266561

Centisome position: 57.42

GC content: 29.76

Gene sequence:

>1764_bases
ATGAAAGCAACAGAAAATAATTTTGGTTTTATGGAGCAAGAATCTTTGATTGAAATTCCATTTTTTCAAAGAGCGTATGT
ATGGGAAGAAGACCAGTGGAAACAACTTTTTGAAGACCTACAAGATAGTTATACAAATAACAGAGAACATTTTTTAGGCT
CAATAGTTTTAAAACAACTTCCTACCAACGCAGGAGAGGGAACAAAAAGAAGCCTAATTGACGGACAACAAAGACTAACA
ACTTTCTCCATTCTCGTAAAATCTTTATATGATAAGCTAGATGAAGATGATAAGCAAGACAATGTTAAATATCTATTCAA
AAAGCCGACCAAAGAAAAGAATCCAAAAATTCAACATTCTAAGGTTGATAAAACTTCTTTTAATCAAATTCTACAGGCTA
AAGATTTTGTATCCTTGCAAGATATTGAAAGATGTAAAGAAGGCAAAGATAAGGATAAAATCAAAAATAGATTGATCCGA
TGCTATGAATATTTTACAAAACGAATAGAGGAAATAGAAAAAAATTATAAAGAATTTTTAGATTTTATTCTCAACTCTAA
ATTATGGGTTACCATTAATTTAGACACAAATGAAGACGAACAAAAAATCTTTGACTCTATTAACACCGCAGGTTTAAAAC
TCACCGCAACAGATATTATTAAAAATGCGCTTTTTGCAAAAGCTATGGCATTAAACGCAGACTATGAAAAGCTTTATAAG
GAGTATTGGGAAGATTTATTTGAAGCAAAAGAAAATAAAGAATTTTGGGAAGAAGAAATTGCCACAGGAAGACTTAAAAG
GGTGCAAAGTGAGATTTTTTTACACGCTTTTGCGATTATCGGGGGTTTCTTTGATGTTGAGAAAGACACTTTAGAAAACT
TAAGTGATATTTATAAACAAAAAACAAGAGATTTTAGTGCACAACAACTAGAATCTTTTTTAAAGAAAATCAAAGAATAT
GCTTTAATTTATCAAAATTTTCCATACATTACCAAAGATACTCCATTATGCTTTGAAAATGATGAGCAACGCTTATTTCA
TATTTTAAAAGTTACAGATACAAATACAATAATGCCTTTAATTTTAGCTTTAAAATTTAACCTTAAAAACGATTTCGATA
CTATGAAAAGCTGCTTAAACTTATTAGAAGTTTTTATCCTTACGCGTTGGCTATGTCTTAAAAGCACAAAAGATTATAAT
AAACTCTTTGCAAATATGACAAAAAAGCTTAACAAAACCAACCCTCTAGAATTTTTAAAAAATAATTTAGAAGAAAAAGA
TATTCCAAAGAGATATGAAATTGAGGATTGTTTAATATCTAAAGATTGCTATCTTGCAAATAAAAAAGCTGCATTAATCC
TTTTTTGGATAGAACTTTATAGACGCCATACAAATAAAAAGACACAAGATAGTATAGAGCTTTCTTATAAATGGACATTG
GAACATCTTATGCCGCAATCGTGGGAAGAAAATTGGAAAAATATTGCAAAAGATGAGACTCACGCGGAAGATTTAATCTA
TCAAATAGGCAATATGACGCTTTTAAAAAGCTCTCTTAATAGTGCAATAAAAAATGCTTCTTGGAAAATCAAACTTAACG
GCGATGGAAGTCGTAAAAATAGCATTAAAAGCTGTGCGGATTTGCTTATTACTAGAGAGCTATGCGATAAAACAATATGG
AACGAAGATACCATAAGGGATAGGACACAGAGATTAACACAAGAATTTTTCAAAATTTGGAATGTTGATATTTTCACTAA
ATAA

Upstream 100 bases:

>100_bases
ACAAAGAGAAAGCGCAAGGGGAGAAAGGCTGAAACTTGCGGTAAATTAGCCTTTTGGTTATAATATTAGATTTGGAAATT
AATAGAAAAAAGGAGAGGGA

Downstream 100 bases:

>100_bases
TTAAAATAAGGACACCCAATGCGCTACTTCATCGGCATAGCATCAAAAAATCATATTCAAATAGGACAAGCAGGGGGATT
TTGCCAACTCTGCCACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKATENNFGFMEQESLIEIPFFQRAYVWEEDQWKQLFEDLQDSYTNNREHFLGSIVLKQLPTNAGEGTKRSLIDGQQRLT
TFSILVKSLYDKLDEDDKQDNVKYLFKKPTKEKNPKIQHSKVDKTSFNQILQAKDFVSLQDIERCKEGKDKDKIKNRLIR
CYEYFTKRIEEIEKNYKEFLDFILNSKLWVTINLDTNEDEQKIFDSINTAGLKLTATDIIKNALFAKAMALNADYEKLYK
EYWEDLFEAKENKEFWEEEIATGRLKRVQSEIFLHAFAIIGGFFDVEKDTLENLSDIYKQKTRDFSAQQLESFLKKIKEY
ALIYQNFPYITKDTPLCFENDEQRLFHILKVTDTNTIMPLILALKFNLKNDFDTMKSCLNLLEVFILTRWLCLKSTKDYN
KLFANMTKKLNKTNPLEFLKNNLEEKDIPKRYEIEDCLISKDCYLANKKAALILFWIELYRRHTNKKTQDSIELSYKWTL
EHLMPQSWEENWKNIAKDETHAEDLIYQIGNMTLLKSSLNSAIKNASWKIKLNGDGSRKNSIKSCADLLITRELCDKTIW
NEDTIRDRTQRLTQEFFKIWNVDIFTK

Sequences:

>Translated_587_residues
MKATENNFGFMEQESLIEIPFFQRAYVWEEDQWKQLFEDLQDSYTNNREHFLGSIVLKQLPTNAGEGTKRSLIDGQQRLT
TFSILVKSLYDKLDEDDKQDNVKYLFKKPTKEKNPKIQHSKVDKTSFNQILQAKDFVSLQDIERCKEGKDKDKIKNRLIR
CYEYFTKRIEEIEKNYKEFLDFILNSKLWVTINLDTNEDEQKIFDSINTAGLKLTATDIIKNALFAKAMALNADYEKLYK
EYWEDLFEAKENKEFWEEEIATGRLKRVQSEIFLHAFAIIGGFFDVEKDTLENLSDIYKQKTRDFSAQQLESFLKKIKEY
ALIYQNFPYITKDTPLCFENDEQRLFHILKVTDTNTIMPLILALKFNLKNDFDTMKSCLNLLEVFILTRWLCLKSTKDYN
KLFANMTKKLNKTNPLEFLKNNLEEKDIPKRYEIEDCLISKDCYLANKKAALILFWIELYRRHTNKKTQDSIELSYKWTL
EHLMPQSWEENWKNIAKDETHAEDLIYQIGNMTLLKSSLNSAIKNASWKIKLNGDGSRKNSIKSCADLLITRELCDKTIW
NEDTIRDRTQRLTQEFFKIWNVDIFTK
>Mature_587_residues
MKATENNFGFMEQESLIEIPFFQRAYVWEEDQWKQLFEDLQDSYTNNREHFLGSIVLKQLPTNAGEGTKRSLIDGQQRLT
TFSILVKSLYDKLDEDDKQDNVKYLFKKPTKEKNPKIQHSKVDKTSFNQILQAKDFVSLQDIERCKEGKDKDKIKNRLIR
CYEYFTKRIEEIEKNYKEFLDFILNSKLWVTINLDTNEDEQKIFDSINTAGLKLTATDIIKNALFAKAMALNADYEKLYK
EYWEDLFEAKENKEFWEEEIATGRLKRVQSEIFLHAFAIIGGFFDVEKDTLENLSDIYKQKTRDFSAQQLESFLKKIKEY
ALIYQNFPYITKDTPLCFENDEQRLFHILKVTDTNTIMPLILALKFNLKNDFDTMKSCLNLLEVFILTRWLCLKSTKDYN
KLFANMTKKLNKTNPLEFLKNNLEEKDIPKRYEIEDCLISKDCYLANKKAALILFWIELYRRHTNKKTQDSIELSYKWTL
EHLMPQSWEENWKNIAKDETHAEDLIYQIGNMTLLKSSLNSAIKNASWKIKLNGDGSRKNSIKSCADLLITRELCDKTIW
NEDTIRDRTQRLTQEFFKIWNVDIFTK

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69718; Mature: 69718

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATENNFGFMEQESLIEIPFFQRAYVWEEDQWKQLFEDLQDSYTNNREHFLGSIVLKQL
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PTNAGEGTKRSLIDGQQRLTTFSILVKSLYDKLDEDDKQDNVKYLFKKPTKEKNPKIQHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC
KVDKTSFNQILQAKDFVSLQDIERCKEGKDKDKIKNRLIRCYEYFTKRIEEIEKNYKEFL
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFILNSKLWVTINLDTNEDEQKIFDSINTAGLKLTATDIIKNALFAKAMALNADYEKLYK
HHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHH
EYWEDLFEAKENKEFWEEEIATGRLKRVQSEIFLHAFAIIGGFFDVEKDTLENLSDIYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KTRDFSAQQLESFLKKIKEYALIYQNFPYITKDTPLCFENDEQRLFHILKVTDTNTIMPL
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
ILALKFNLKNDFDTMKSCLNLLEVFILTRWLCLKSTKDYNKLFANMTKKLNKTNPLEFLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH
NNLEEKDIPKRYEIEDCLISKDCYLANKKAALILFWIELYRRHTNKKTQDSIELSYKWTL
CCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEH
EHLMPQSWEENWKNIAKDETHAEDLIYQIGNMTLLKSSLNSAIKNASWKIKLNGDGSRKN
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCHH
SIKSCADLLITRELCDKTIWNEDTIRDRTQRLTQEFFKIWNVDIFTK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKATENNFGFMEQESLIEIPFFQRAYVWEEDQWKQLFEDLQDSYTNNREHFLGSIVLKQL
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PTNAGEGTKRSLIDGQQRLTTFSILVKSLYDKLDEDDKQDNVKYLFKKPTKEKNPKIQHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC
KVDKTSFNQILQAKDFVSLQDIERCKEGKDKDKIKNRLIRCYEYFTKRIEEIEKNYKEFL
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFILNSKLWVTINLDTNEDEQKIFDSINTAGLKLTATDIIKNALFAKAMALNADYEKLYK
HHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHH
EYWEDLFEAKENKEFWEEEIATGRLKRVQSEIFLHAFAIIGGFFDVEKDTLENLSDIYKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KTRDFSAQQLESFLKKIKEYALIYQNFPYITKDTPLCFENDEQRLFHILKVTDTNTIMPL
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
ILALKFNLKNDFDTMKSCLNLLEVFILTRWLCLKSTKDYNKLFANMTKKLNKTNPLEFLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH
NNLEEKDIPKRYEIEDCLISKDCYLANKKAALILFWIELYRRHTNKKTQDSIELSYKWTL
CCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEH
EHLMPQSWEENWKNIAKDETHAEDLIYQIGNMTLLKSSLNSAIKNASWKIKLNGDGSRKN
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCHH
SIKSCADLLITRELCDKTIWNEDTIRDRTQRLTQEFFKIWNVDIFTK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA