| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is glnH [H]
Identifier: 32266237
GI number: 32266237
Start: 722420
End: 723247
Strand: Direct
Name: glnH [H]
Synonym: HH0738
Alternate gene names: 32266237
Gene position: 722420-723247 (Clockwise)
Preceding gene: 32266236
Following gene: 32266239
Centisome position: 40.15
GC content: 35.99
Gene sequence:
>828_bases ATGAAAAAATTGCTTTTAGCGCTATTTGGCGTAGTATTTATGATAGGACTGAGTGCGTGTGGAGATAATCAAAGCACAAA AGAGTCAAAAAATGCCTTAGAAGAAATTAAACAAAAAGGTGTTGTGCGCATAGGAGTATTTAGCGATAAACCACCCTTTG GTTTCATCAATGAAAAAGGACAAAATGATGGTTTTGATGTTTATATTGCAAAACGCATCGCTAAAGATTTACTTGGAGAT GAAAATAAAGTTGAATTTGTGCTTACTGAAGCTGCTTCTCGCGTAGAGTTTTTGCGCTCTAATAAGGTAGATATTATTAT GGCAAACTTCACTCAAACTCCAGAACGCGAGGCAGTAGTAGATTTTGCTAAACCCTATATGAAAGTGGCTCTTGGTGTTA TATCTCCAAATGGCGAGATTAAAAGCATTGATGACTTAAAAGGGAAAAAACTAATTGTCAATAAAGGCACAACAGCTGAC GCATTCTTTAGCAAAAACTACCCTGATATTGAATTGCTTAAATATGAGCAAAATACTGAAGCTTTTCTCGCGCTTAAAGA TAAAAGAGGTGATGCACTTGCTCACGATAATACTCTTTTGCTCGCGTGGGCTATGGAAAATGAAGGTTTTAACGTGGGCA TTCCAACACTAGGTGAAGAAGAAAATATTGCTCCAGCAATAAAAAAAGGAAATATTGAGCTTAAAAATTGGCTTGATAAT GAAATTACATCACTTACCCACGAAGGCTTTATGAAAGAAGCTTATGAGAAAACTCTCGCCCCTATTTTTGGCGAGGAAAA AATGGATTCTGTTATTTTCTCTCATTAA
Upstream 100 bases:
>100_bases TTATGAAAGAGAACAAAGAATCTTTAATGATATTTACTTCTATCACATTTTTTTGTGGCACAATAATCTTTAATACCCAT TTATAAAAGGAGTTAAATAA
Downstream 100 bases:
>100_bases TTTTTACTCCATTGCTTAAAGTTTAAGCAATGGATTTTCATTCCTCCCATTTTTGTAATGCTAAATCTGTATTGATATGG CAATACCCAAGTGCATTTTT
Product: amino-acid ABC transporter periplasmic solute-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKGQNDGFDVYIAKRIAKDLLGD ENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVVDFAKPYMKVALGVISPNGEIKSIDDLKGKKLIVNKGTTAD AFFSKNYPDIELLKYEQNTEAFLALKDKRGDALAHDNTLLLAWAMENEGFNVGIPTLGEEENIAPAIKKGNIELKNWLDN EITSLTHEGFMKEAYEKTLAPIFGEEKMDSVIFSH
Sequences:
>Translated_275_residues MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKGQNDGFDVYIAKRIAKDLLGD ENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVVDFAKPYMKVALGVISPNGEIKSIDDLKGKKLIVNKGTTAD AFFSKNYPDIELLKYEQNTEAFLALKDKRGDALAHDNTLLLAWAMENEGFNVGIPTLGEEENIAPAIKKGNIELKNWLDN EITSLTHEGFMKEAYEKTLAPIFGEEKMDSVIFSH >Mature_275_residues MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKGQNDGFDVYIAKRIAKDLLGD ENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVVDFAKPYMKVALGVISPNGEIKSIDDLKGKKLIVNKGTTAD AFFSKNYPDIELLKYEQNTEAFLALKDKRGDALAHDNTLLLAWAMENEGFNVGIPTLGEEENIAPAIKKGNIELKNWLDN EITSLTHEGFMKEAYEKTLAPIFGEEKMDSVIFSH
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=221, Percent_Identity=28.0542986425339, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787085, Length=255, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=25.5725190839695, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787031, Length=198, Percent_Identity=29.7979797979798, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=24.4635193133047, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30602; Mature: 30602
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKG CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC QNDGFDVYIAKRIAKDLLGDENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVV CCCCEEHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH DFAKPYMKVALGVISPNGEIKSIDDLKGKKLIVNKGTTADAFFSKNYPDIELLKYEQNTE HHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEEEECCCCC AFLALKDKRGDALAHDNTLLLAWAMENEGFNVGIPTLGEEENIAPAIKKGNIELKNWLDN EEEEEECCCCCEEECCCEEEEEEEECCCCCEECCCCCCCCCCCCCHHHCCCEEHHHHHHH EITSLTHEGFMKEAYEKTLAPIFGEEKMDSVIFSH HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MKKLLLALFGVVFMIGLSACGDNQSTKESKNALEEIKQKGVVRIGVFSDKPPFGFINEKG CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC QNDGFDVYIAKRIAKDLLGDENKVEFVLTEAASRVEFLRSNKVDIIMANFTQTPEREAVV CCCCEEHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH DFAKPYMKVALGVISPNGEIKSIDDLKGKKLIVNKGTTADAFFSKNYPDIELLKYEQNTE HHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEEEECCCCC AFLALKDKRGDALAHDNTLLLAWAMENEGFNVGIPTLGEEENIAPAIKKGNIELKNWLDN EEEEEECCCCCEEECCCEEEEEEEECCCCCEECCCCCCCCCCCCCHHHCCCEEHHHHHHH EITSLTHEGFMKEAYEKTLAPIFGEEKMDSVIFSH HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]