| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is azlD [H]
Identifier: 32266210
GI number: 32266210
Start: 690299
End: 690640
Strand: Direct
Name: azlD [H]
Synonym: HH0711
Alternate gene names: 32266210
Gene position: 690299-690640 (Clockwise)
Preceding gene: 32266209
Following gene: 32266220
Centisome position: 38.37
GC content: 33.04
Gene sequence:
>342_bases TTGTCGCCTGAAATTTTGCACTCGGTCCTTCTTATTGCGCTTATTGCGCTTAATACTCTCTTAAGTCGCTTTTTGCCTTT TATTATCTTTGCTAAATCTACACCCACATTCATTGTCTCTTTAGGTAAAGTGCTGCCAAGTGCAATTATTGCAATGCTTA TTATATATTGCCTTAAAGATATGGATTTAGAGCACTCTCCATATGGACTTAATGAAATTATTGCTGTCTTAGTAGTAAGC TACATACATATAGTGTTTAAGATTCCCGTTTTAAGCATTGTATGTGGAACTATCACTTATATGATATTAATACAAAATGC AATTTTAGATTTTATACCCTAG
Upstream 100 bases:
>100_bases ATAATAAGTTTAATATGTTTATATATTTTTGGGGCACAACAATTTTTAATCCCCTCACTTGTGGGCATTTGTGTTATATT AAGCCTATGGAGAAAACCCA
Downstream 100 bases:
>100_bases AATCAAAAATCTCTAGGGTATAAATAAATATTAAGCAAAAGCACCTTTAAGTGTCTTTACCCACGCTTGAATTCTGCTAT CTGTCATATCTTCTTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSPEILHSVLLIALIALNTLLSRFLPFIIFAKSTPTFIVSLGKVLPSAIIAMLIIYCLKDMDLEHSPYGLNEIIAVLVVS YIHIVFKIPVLSIVCGTITYMILIQNAILDFIP
Sequences:
>Translated_113_residues MSPEILHSVLLIALIALNTLLSRFLPFIIFAKSTPTFIVSLGKVLPSAIIAMLIIYCLKDMDLEHSPYGLNEIIAVLVVS YIHIVFKIPVLSIVCGTITYMILIQNAILDFIP >Mature_112_residues SPEILHSVLLIALIALNTLLSRFLPFIIFAKSTPTFIVSLGKVLPSAIIAMLIIYCLKDMDLEHSPYGLNEIIAVLVVSY IHIVFKIPVLSIVCGTITYMILIQNAILDFIP
Specific function: Involved in branched-chain amino acid transport [H]
COG id: COG1687
COG function: function code E; Predicted branched-chain amino acid permeases (azaleucine resistance)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AzlD/HI_1737/HP1330 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008407 [H]
Pfam domain/function: PF05437 AzlD [H]
EC number: NA
Molecular weight: Translated: 12512; Mature: 12380
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPEILHSVLLIALIALNTLLSRFLPFIIFAKSTPTFIVSLGKVLPSAIIAMLIIYCLKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MDLEHSPYGLNEIIAVLVVSYIHIVFKIPVLSIVCGTITYMILIQNAILDFIP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPEILHSVLLIALIALNTLLSRFLPFIIFAKSTPTFIVSLGKVLPSAIIAMLIIYCLKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MDLEHSPYGLNEIIAVLVVSYIHIVFKIPVLSIVCGTITYMILIQNAILDFIP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9287000; 9308178; 9384377 [H]