Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

Click here to switch to the map view.

The map label for this gene is 32266118

Identifier: 32266118

GI number: 32266118

Start: 597631

End: 598245

Strand: Direct

Name: 32266118

Synonym: HH0619

Alternate gene names: NA

Gene position: 597631-598245 (Clockwise)

Preceding gene: 32266117

Following gene: 32266119

Centisome position: 33.22

GC content: 31.22

Gene sequence:

>615_bases
TTGCTGAGCTTGCCGTGTGCAAGCTTCATAGTGTTTATGAACTTGATAAATAAATGCGGATTTACTATGGAAAATATCAG
TGATTGGTTTTTGCGTATCATACGTGAAGATGAAAAAAAAGGTATTATGAGTGGGTGGATTGAAGAAAAACGTTTTATTT
TTCTACCTTCTATGACATATACGATTGAACACATTATCAAAGGTGGAAGCATTATTGTCCTTACCGATGAAAAATGTGAA
TGGTTTGGAGACTATATCATTACCCATATTAATCAATCGCACAAAGGGCGTCCTTTTTTTCCTATTGTCCAAATTAAATA
TCTACACAATATGATAGATTCTAACAAAGAAGGGAGTATTCAAGGTTTTAAACTCATTAAAGATATGCTTGATATGATGT
ATTCAAATTATAGATTTTGGTATATTGGCAAAAAAAACACACGAGCAGATTTTGCAAAAAATAGCGGTGAAGGGTGGTTT
TGGATATTTGATGAAAATAATACATTTTTAAGTTCCACTGATGAAAAACTTGATTATAAACTCTTAAGTCTTTTTAAACT
CTTTGATAGAGCTATTCTTGAGGCTATGTTTAATAGAATCTCACTTGATATATAG

Upstream 100 bases:

>100_bases
GTAGCAAGCACAGCATTTAAAGCGTTAGCACAAGATGATATTAATATTATGATGATAAGCACAAGTGAAATTAAAATTTC
AATGATTATTAACGCCCAAT

Downstream 100 bases:

>100_bases
CAAAAAGAAGGAGGATTAGAAAATGATAGGAGAAATTCATATAACACCTTTTCCTCAGAACCTTATAGAAGATTTTACTC
ACAATCGTGATGAGCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLSLPCASFIVFMNLINKCGFTMENISDWFLRIIREDEKKGIMSGWIEEKRFIFLPSMTYTIEHIIKGGSIIVLTDEKCE
WFGDYIITHINQSHKGRPFFPIVQIKYLHNMIDSNKEGSIQGFKLIKDMLDMMYSNYRFWYIGKKNTRADFAKNSGEGWF
WIFDENNTFLSSTDEKLDYKLLSLFKLFDRAILEAMFNRISLDI

Sequences:

>Translated_204_residues
MLSLPCASFIVFMNLINKCGFTMENISDWFLRIIREDEKKGIMSGWIEEKRFIFLPSMTYTIEHIIKGGSIIVLTDEKCE
WFGDYIITHINQSHKGRPFFPIVQIKYLHNMIDSNKEGSIQGFKLIKDMLDMMYSNYRFWYIGKKNTRADFAKNSGEGWF
WIFDENNTFLSSTDEKLDYKLLSLFKLFDRAILEAMFNRISLDI
>Mature_204_residues
MLSLPCASFIVFMNLINKCGFTMENISDWFLRIIREDEKKGIMSGWIEEKRFIFLPSMTYTIEHIIKGGSIIVLTDEKCE
WFGDYIITHINQSHKGRPFFPIVQIKYLHNMIDSNKEGSIQGFKLIKDMLDMMYSNYRFWYIGKKNTRADFAKNSGEGWF
WIFDENNTFLSSTDEKLDYKLLSLFKLFDRAILEAMFNRISLDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24160; Mature: 24160

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLPCASFIVFMNLINKCGFTMENISDWFLRIIREDEKKGIMSGWIEEKRFIFLPSMTY
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHH
TIEHIIKGGSIIVLTDEKCEWFGDYIITHINQSHKGRPFFPIVQIKYLHNMIDSNKEGSI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
QGFKLIKDMLDMMYSNYRFWYIGKKNTRADFAKNSGEGWFWIFDENNTFLSSTDEKLDYK
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCEEEEEEECCCCEECCCCHHHHHH
LLSLFKLFDRAILEAMFNRISLDI
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLPCASFIVFMNLINKCGFTMENISDWFLRIIREDEKKGIMSGWIEEKRFIFLPSMTY
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCHHH
TIEHIIKGGSIIVLTDEKCEWFGDYIITHINQSHKGRPFFPIVQIKYLHNMIDSNKEGSI
HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
QGFKLIKDMLDMMYSNYRFWYIGKKNTRADFAKNSGEGWFWIFDENNTFLSSTDEKLDYK
HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCEEEEEEECCCCEECCCCHHHHHH
LLSLFKLFDRAILEAMFNRISLDI
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA