| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266056
Identifier: 32266056
GI number: 32266056
Start: 534065
End: 535198
Strand: Direct
Name: 32266056
Synonym: HH0557
Alternate gene names: NA
Gene position: 534065-535198 (Clockwise)
Preceding gene: 32266039
Following gene: 32266057
Centisome position: 29.68
GC content: 38.18
Gene sequence:
>1134_bases ATGAAACAACTTAAAGACATCAAAGCAGTTTGTGATTTTATAAAAGAACGACCCTACTCAGCAGAGAAGTTTGGCTTTTA TGTAGAACATTTGCAACAAGCGTTGGAGGGCTTAAAGCAAATCCTTGAAAGCAAGAAAAATAAGAAAATCAGCGATAAAG ATTTAGCTAGAGTGCTTAAATGTATAAACAATACAGAATACTTTGTGAGGATAGAAGAAAAAACCACCAAAACAAAGTAT GCGCTTGAATGTGCGCCTTTAGAGCTTGTAGAATTTATTATCCAAAACGCACAGGATAAAGACTTTTTGCTTTCGCAAAA GGGTGGCAAAAAAAGCCGTGATTTTTTAGCAAGTGCCTTAGATGGTGGCAGGGTAGATATTGCAGAACTTCTTATCAAAA ATGGCGTGGAATTTAAGCAAGATTATTTAAAGGAGCTAAGATATGCTTGGCGTGATATACTTGACATTGAGGCGCAAACG AAAGAATTTGAGTGTTTAGGGATAAAAAAGGGAGAGACTTTAAAAAAGATATGGGATTTGCTAAGCCCTTTTAGTATTGG TGAAATTTACACCGAGGCGTTTTCTTATTACAATGCGGTGCATAATTACAGAGACACTTTTACAGGAGCGCAGCAAGTTT TTATCTACGCACTTAAAAACAAGCTTTTTAGCGAGGAAGTGCTAGATAATAGCTTCTTTGCTTTGCCAAAAGCGGGGCTA AGTTTGTTTTTAAACGCAAAAGACCTTAAAGGGCTTAGCAACGATGATGTATATACCAAGCCAAAGGGAGAAATTGTGCC TTTTGTCTTTGCGATGTTTGAGGATGAAACCTTAGAAGTGCTAGAATACGCACTCTTTCTTGGGCTTCACAAGGGCAGAA AAAACGCGCAGGGCAAGGACTTTGAGAGCTTTTTGCAAGGCAAGATTGAGGAGTATAAAATCCTCACCACAAAGGGAAAC AAGTATGGCACGATATTTGAAGAGGACGAGTGGGATTTGGCTTATTTTCTTTCTTTGCAAAAATTTATGCAAGGTTTAGA AAGCCTTGAAAAAGGTGAAGCGGTTGTGGTAGATGATGAGACTTCCAAGATGTTTGCGAGGATTGAGGAAATCCCGCAAA ATCTCTTAGTATAA
Upstream 100 bases:
>100_bases ATGCAATTTTTAGAATCTTTTGTCTGCGGATTCAACGCCTGGACTTGATTACAAAAAAACAATATAATGTAGCACGCAAG AATGATTCAAGGGAGAAAAA
Downstream 100 bases:
>100_bases GATTGTAAGGCTTTAAGCAAAGGGCATTCTCCATTTTCGCCTTTAATGTTTAGCTCATAGCAAGATATTTGCGTAGGATA ATCTTTTAAAATATCCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV
Sequences:
>Translated_377_residues MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV >Mature_377_residues MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLKCINNTEYFVRIEEKTTKTKY ALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASALDGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQT KEFECLGIKKGETLKKIWDLLSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKDFESFLQGKIEEYKILTTKGN KYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDETSKMFARIEEIPQNLLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43458; Mature: 43458
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLK CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH CINNTEYFVRIEEKTTKTKYALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASAL HHCCCEEEEEEECCCCCHHHEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC DGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQTKEFECLGIKKGETLKKIWDL CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH LSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCH SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKD HEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC FESFLQGKIEEYKILTTKGNKYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDE HHHHHCCCHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC TSKMFARIEEIPQNLLV HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQLKDIKAVCDFIKERPYSAEKFGFYVEHLQQALEGLKQILESKKNKKISDKDLARVLK CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH CINNTEYFVRIEEKTTKTKYALECAPLELVEFIIQNAQDKDFLLSQKGGKKSRDFLASAL HHCCCEEEEEEECCCCCHHHEEECCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC DGGRVDIAELLIKNGVEFKQDYLKELRYAWRDILDIEAQTKEFECLGIKKGETLKKIWDL CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH LSPFSIGEIYTEAFSYYNAVHNYRDTFTGAQQVFIYALKNKLFSEEVLDNSFFALPKAGL HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCH SLFLNAKDLKGLSNDDVYTKPKGEIVPFVFAMFEDETLEVLEYALFLGLHKGRKNAQGKD HEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC FESFLQGKIEEYKILTTKGNKYGTIFEEDEWDLAYFLSLQKFMQGLESLEKGEAVVVDDE HHHHHCCCHHHEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECC TSKMFARIEEIPQNLLV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA