| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is 32266031
Identifier: 32266031
GI number: 32266031
Start: 512154
End: 514208
Strand: Direct
Name: 32266031
Synonym: HH0532
Alternate gene names: NA
Gene position: 512154-514208 (Clockwise)
Preceding gene: 32266030
Following gene: 32266032
Centisome position: 28.47
GC content: 38.54
Gene sequence:
>2055_bases ATGCGCCTTTTTCTGATTTTAATTTTTATATTTAGCATACTTCACGCGGAGAATCTTGTGCGTGATTTTGAACTTTATAA ACTCAATGATGGAGACAAAAGAGCACCTACTTTACTCCTTATGGGCGGGATTCACGGCGATGAACCCGGAGCATATTACT CTACTGATTTATTTATGCGTCATTACAAAATCACAAAGGGTAGTGTGTGGGTTGTGCCTGTTGTTAATCCTCATAGTATG TTTGCAAATGTGCGTGGTTTATATGGTGATATGAATCGCAAATTTGCTGCGCTTGCTCAAAACGACCCTGATTATCAGAG TATCCAAAAAATCAAAGAGCTTCTTGCTCATCCACAGATTGATATTTCAATGCACCTCCACGATGGGAGTGGATATTGGC GTCCTACCTATGTGAGTAACCTCCTTAATCCGCTCCGTTGGGGAAATTGCTCGGTAATAGACCAAGTAGAGCTTAAAGGC TCAAAATATGGCAAATTAGAATCTTTTGTGATTCAAATGGTGGCAGATATTAATGAGTATATCCTACACCCTCTCCATCG CTACTCTGTGCATAATACTCATACAAAATCTAAAAATGATACACAACAACTCAAAGCCCTCACTTTTTTCTCACTCTCGC TCGGCAAACCAGCCCTCACAAATGAAGCAAGCAAAGAGCTTGATATTCAAATACGCGTATATTATCACCTCCTCGCCATA GAATCTCTACTCGGACAGCTTGGTATAGAATTTGAGAGAGATTTTGAACTTAATCCCGCCTCTATCAAAAAACTTATCTC TACTGCACATTTACAAGCACATATTGAAGGACTCATCACTTTGCCCTTAGATTCTCTACGCCCTCTTATTACTTATTTTC CGCTTCCTCAAGGCGTAGAACCAAAACATATTAAGATTCAAAGCCCAAGTCATATACTCGGCTTAGTGAAAAATCAACAA GGGGGTATAGAGATTAAATATGGCTCACGCACACTTAGCACACTCTCACCCCAATGGAGCGCTTTTGATAGCTCATTGGG CAGTGTGAATATGAAAATTGATGATAAAATGCAGTCTGTGCATTTGGGTTCAATAGTTTATGCAAAAGAAAGTATAGAGT TTGAACCCATGAGTGAATATCGCGTAAATATTATAGGCTATGTCAAGCCTAATGATACTTCGCCTTTACCCAATGAAAGT GGTATCAAAGTCCATAAAAAAGACTTTATGCCACGATATAGCCTTGATAAACAATCTCTTATTTATCGCGCTGAAATCTA TCGCAAAGATGTATTTAGCGGTATGATAACTATTTCTTTTGATAAACCTCCACTTGATAATCCCACACCTTATAAACTTA TAGCCTATAAACCTGCACCTAATTCACCCCTTGCTTTAGCTCTAGCACACACTCATACCAAACAGACATCACCAAGCACT ATACCACCTAAAAATATAGCCCTTGCTTCTAAAGAATCTATGCCTAAAAATGAACAAAAAGAATCTACTAAGCCTACAAT CAAAATACCACAACAAACTATGACTCGTTTTGTTAGACCCTCTATTGGCGTTAATGTCCGATTAAAACCAAGCATACAAG ATTCTATAATTGCGAAACTTCCACAAGGAGCGAAAGTAGAAGTTTTAGAACAAGTGGGTAAATGGAGCAAAATTGCAAAA GATAGTAAAAATGGTGTAAATCAAGAGGGCTACATTAGCTCATATATGCTAACAGAGGCACTTCAAGATGCTCCGCAAGA GAATACAAAACCTATAGAATCCACACCAAAAGATATATCACAAAAAACTCAAGATTCCTCTGTGAAAGCACTTCCTATAA ATGCACAAGTAAAAGTAAATATTGCGCTTGTGCGCTTAGAGCCTTCCATCACTGCGCCCATTGTGGCTAAAGCACCTTTG GGACGCAAAATGCAAATTCTTTCTTTTGAGGGGCAAAATGGAGAATGGGCAAAGATTCATTATATTTTTGAGGGGAAACA AGGGGTGCGTGAAATTAATGGCTATATAGCAAAACATCTCCTTAACCCTCTATAA
Upstream 100 bases:
>100_bases ATATCTTACAAATACGCGAACTCGCTAAAGGCTGTGCCACACTCTATAAAGAAATGGAAGAAGAGAGAACTATGCGAAGA GAAAAAAACAAAGGATTATG
Downstream 100 bases:
>100_bases AAAGGCTATATGATGGGGTTTGAAATTACTGAAAACACATTTGTGATTTCTGATAGTCATTTTGGACATAAGGCTGTTTT GCAGCGCGAACCTAGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Purine Nucleoside Phosphorylase; Tat Pathway Signal Sequence Domain Protein; Secreted Protein
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MRLFLILIFIFSILHAENLVRDFELYKLNDGDKRAPTLLLMGGIHGDEPGAYYSTDLFMRHYKITKGSVWVVPVVNPHSM FANVRGLYGDMNRKFAALAQNDPDYQSIQKIKELLAHPQIDISMHLHDGSGYWRPTYVSNLLNPLRWGNCSVIDQVELKG SKYGKLESFVIQMVADINEYILHPLHRYSVHNTHTKSKNDTQQLKALTFFSLSLGKPALTNEASKELDIQIRVYYHLLAI ESLLGQLGIEFERDFELNPASIKKLISTAHLQAHIEGLITLPLDSLRPLITYFPLPQGVEPKHIKIQSPSHILGLVKNQQ GGIEIKYGSRTLSTLSPQWSAFDSSLGSVNMKIDDKMQSVHLGSIVYAKESIEFEPMSEYRVNIIGYVKPNDTSPLPNES GIKVHKKDFMPRYSLDKQSLIYRAEIYRKDVFSGMITISFDKPPLDNPTPYKLIAYKPAPNSPLALALAHTHTKQTSPST IPPKNIALASKESMPKNEQKESTKPTIKIPQQTMTRFVRPSIGVNVRLKPSIQDSIIAKLPQGAKVEVLEQVGKWSKIAK DSKNGVNQEGYISSYMLTEALQDAPQENTKPIESTPKDISQKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPL GRKMQILSFEGQNGEWAKIHYIFEGKQGVREINGYIAKHLLNPL
Sequences:
>Translated_684_residues MRLFLILIFIFSILHAENLVRDFELYKLNDGDKRAPTLLLMGGIHGDEPGAYYSTDLFMRHYKITKGSVWVVPVVNPHSM FANVRGLYGDMNRKFAALAQNDPDYQSIQKIKELLAHPQIDISMHLHDGSGYWRPTYVSNLLNPLRWGNCSVIDQVELKG SKYGKLESFVIQMVADINEYILHPLHRYSVHNTHTKSKNDTQQLKALTFFSLSLGKPALTNEASKELDIQIRVYYHLLAI ESLLGQLGIEFERDFELNPASIKKLISTAHLQAHIEGLITLPLDSLRPLITYFPLPQGVEPKHIKIQSPSHILGLVKNQQ GGIEIKYGSRTLSTLSPQWSAFDSSLGSVNMKIDDKMQSVHLGSIVYAKESIEFEPMSEYRVNIIGYVKPNDTSPLPNES GIKVHKKDFMPRYSLDKQSLIYRAEIYRKDVFSGMITISFDKPPLDNPTPYKLIAYKPAPNSPLALALAHTHTKQTSPST IPPKNIALASKESMPKNEQKESTKPTIKIPQQTMTRFVRPSIGVNVRLKPSIQDSIIAKLPQGAKVEVLEQVGKWSKIAK DSKNGVNQEGYISSYMLTEALQDAPQENTKPIESTPKDISQKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPL GRKMQILSFEGQNGEWAKIHYIFEGKQGVREINGYIAKHLLNPL >Mature_684_residues MRLFLILIFIFSILHAENLVRDFELYKLNDGDKRAPTLLLMGGIHGDEPGAYYSTDLFMRHYKITKGSVWVVPVVNPHSM FANVRGLYGDMNRKFAALAQNDPDYQSIQKIKELLAHPQIDISMHLHDGSGYWRPTYVSNLLNPLRWGNCSVIDQVELKG SKYGKLESFVIQMVADINEYILHPLHRYSVHNTHTKSKNDTQQLKALTFFSLSLGKPALTNEASKELDIQIRVYYHLLAI ESLLGQLGIEFERDFELNPASIKKLISTAHLQAHIEGLITLPLDSLRPLITYFPLPQGVEPKHIKIQSPSHILGLVKNQQ GGIEIKYGSRTLSTLSPQWSAFDSSLGSVNMKIDDKMQSVHLGSIVYAKESIEFEPMSEYRVNIIGYVKPNDTSPLPNES GIKVHKKDFMPRYSLDKQSLIYRAEIYRKDVFSGMITISFDKPPLDNPTPYKLIAYKPAPNSPLALALAHTHTKQTSPST IPPKNIALASKESMPKNEQKESTKPTIKIPQQTMTRFVRPSIGVNVRLKPSIQDSIIAKLPQGAKVEVLEQVGKWSKIAK DSKNGVNQEGYISSYMLTEALQDAPQENTKPIESTPKDISQKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPL GRKMQILSFEGQNGEWAKIHYIFEGKQGVREINGYIAKHLLNPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76840; Mature: 76840
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFLILIFIFSILHAENLVRDFELYKLNDGDKRAPTLLLMGGIHGDEPGAYYSTDLFMR CHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEHHHEEE HYKITKGSVWVVPVVNPHSMFANVRGLYGDMNRKFAALAQNDPDYQSIQKIKELLAHPQI EEEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCE DISMHLHDGSGYWRPTYVSNLLNPLRWGNCSVIDQVELKGSKYGKLESFVIQMVADINEY EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ILHPLHRYSVHNTHTKSKNDTQQLKALTFFSLSLGKPALTNEASKELDIQIRVYYHLLAI HHCHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHH ESLLGQLGIEFERDFELNPASIKKLISTAHLQAHIEGLITLPLDSLRPLITYFPLPQGVE HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHEECEEEEECHHHHCHHHHCCCCCCCCC PKHIKIQSPSHILGLVKNQQGGIEIKYGSRTLSTLSPQWSAFDSSLGSVNMKIDDKMQSV CCEEEECCCCCEEEEEECCCCCEEEEECCEEHHHCCCCHHHHHCCCCEEEEEECCCHHHE HLGSIVYAKESIEFEPMSEYRVNIIGYVKPNDTSPLPNESGIKVHKKDFMPRYSLDKQSL EECEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHH IYRAEIYRKDVFSGMITISFDKPPLDNPTPYKLIAYKPAPNSPLALALAHTHTKQTSPST HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC IPPKNIALASKESMPKNEQKESTKPTIKIPQQTMTRFVRPSIGVNVRLKPSIQDSIIAKL CCCCCEEEECCCCCCCCCHHHCCCCEEECCHHHHHHHHCCCCCEEEEECCCHHHHHHHHC PQGAKVEVLEQVGKWSKIAKDSKNGVNQEGYISSYMLTEALQDAPQENTKPIESTPKDIS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH QKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPLGRKMQILSFEGQNGEWAKIH HHCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEE YIFEGKQGVREINGYIAKHLLNPL EEECCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLFLILIFIFSILHAENLVRDFELYKLNDGDKRAPTLLLMGGIHGDEPGAYYSTDLFMR CHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEHHHEEE HYKITKGSVWVVPVVNPHSMFANVRGLYGDMNRKFAALAQNDPDYQSIQKIKELLAHPQI EEEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCE DISMHLHDGSGYWRPTYVSNLLNPLRWGNCSVIDQVELKGSKYGKLESFVIQMVADINEY EEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH ILHPLHRYSVHNTHTKSKNDTQQLKALTFFSLSLGKPALTNEASKELDIQIRVYYHLLAI HHCHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHH ESLLGQLGIEFERDFELNPASIKKLISTAHLQAHIEGLITLPLDSLRPLITYFPLPQGVE HHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHEECEEEEECHHHHCHHHHCCCCCCCCC PKHIKIQSPSHILGLVKNQQGGIEIKYGSRTLSTLSPQWSAFDSSLGSVNMKIDDKMQSV CCEEEECCCCCEEEEEECCCCCEEEEECCEEHHHCCCCHHHHHCCCCEEEEEECCCHHHE HLGSIVYAKESIEFEPMSEYRVNIIGYVKPNDTSPLPNESGIKVHKKDFMPRYSLDKQSL EECEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHH IYRAEIYRKDVFSGMITISFDKPPLDNPTPYKLIAYKPAPNSPLALALAHTHTKQTSPST HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC IPPKNIALASKESMPKNEQKESTKPTIKIPQQTMTRFVRPSIGVNVRLKPSIQDSIIAKL CCCCCEEEECCCCCCCCCHHHCCCCEEECCHHHHHHHHCCCCCEEEEECCCHHHHHHHHC PQGAKVEVLEQVGKWSKIAKDSKNGVNQEGYISSYMLTEALQDAPQENTKPIESTPKDIS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH QKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPLGRKMQILSFEGQNGEWAKIH HHCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCEEEEE YIFEGKQGVREINGYIAKHLLNPL EEECCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA