| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is murB
Identifier: 32265938
GI number: 32265938
Start: 420004
End: 420795
Strand: Direct
Name: murB
Synonym: HH0439
Alternate gene names: 32265938
Gene position: 420004-420795 (Clockwise)
Preceding gene: 32265937
Following gene: 32265939
Centisome position: 23.34
GC content: 38.76
Gene sequence:
>792_bases GTGCAAACTCACATTATTAATTTTGCAAAGTATTCAAGTATCAAAATCGGTGCGCCACTTGAAGTTTCTCTTATACAAAC TCCACAAGATGCTATTTCTGCCCTTTCACAAAATATGCGCATTATTGGCAAAGCGAACAATCTCCTTGTCTCACCCGCAG CACAAAAACTTGCTATGCTTGATAAGCATTTTGCATATCTTAAAGATTGTGGTAATTATATTGAAATTGGTGGTGCATAT AGTTCTGGGCGGATTTTTAGCTATTTTAAATCACACAATCTTGCTGGTGCAGAGTTCCTGCAAGCCTTACCCGGAAGTTT GGGTGGATTAGTCAAAATGAATGCAGGAATGAAAAGCTATGAAATTAAACAACTTCTTCAAGCAATAAATGTCAATGGAA AGTGGCAAGATAGAGAATCTTTCCCTATGAATTATCGTGATAGTGGTATAGAGGGTGTTATCCTTGCTGCCAGATTCCAT AAACGAGAGGGTTTCAACAATGCACTTCAAGCAGATTTTATCGCTCTGCGTAAGAATCACCCTAAAGAGCCAAGCTGCGG GAGCTGCTTTAAAAATCCAAAAGGAGATTTTGCAGGACGCCTTTTAGAATCTGTAGGCTTAAAAGGCTATTGTATTGGAG ATGCAGCCTTTAGTGAAAAACACGCAAACTTTCTTATTAATAAAGGCAAGGCTACCTTTGAAGATGCGCTCTCTCTTATC ACACTTGCCAAAAAACGTGTATTTGAAGCAAGCGGAATTGATTTAGAGTGCGAAGTGCAGATTCTACAATAA
Upstream 100 bases:
>100_bases TGTTGCTGTAATTATATTTACTATGCCGTGGATGATAAATATGATTACAGATTATACGCGTATGCTTTTTACAATGATTT CTAATATTAATTTTTAGCCT
Downstream 100 bases:
>100_bases AATAATCAAATGATAATATTCCTTATTTTTTACCCTCATTTGATAAAATTTTTAATACATCAACATTAAAGTGTCCCGTA TTGGTTGCCTTAAGATATTC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MQTHIINFAKYSSIKIGAPLEVSLIQTPQDAISALSQNMRIIGKANNLLVSPAAQKLAMLDKHFAYLKDCGNYIEIGGAY SSGRIFSYFKSHNLAGAEFLQALPGSLGGLVKMNAGMKSYEIKQLLQAINVNGKWQDRESFPMNYRDSGIEGVILAARFH KREGFNNALQADFIALRKNHPKEPSCGSCFKNPKGDFAGRLLESVGLKGYCIGDAAFSEKHANFLINKGKATFEDALSLI TLAKKRVFEASGIDLECEVQILQ
Sequences:
>Translated_263_residues MQTHIINFAKYSSIKIGAPLEVSLIQTPQDAISALSQNMRIIGKANNLLVSPAAQKLAMLDKHFAYLKDCGNYIEIGGAY SSGRIFSYFKSHNLAGAEFLQALPGSLGGLVKMNAGMKSYEIKQLLQAINVNGKWQDRESFPMNYRDSGIEGVILAARFH KREGFNNALQADFIALRKNHPKEPSCGSCFKNPKGDFAGRLLESVGLKGYCIGDAAFSEKHANFLINKGKATFEDALSLI TLAKKRVFEASGIDLECEVQILQ >Mature_263_residues MQTHIINFAKYSSIKIGAPLEVSLIQTPQDAISALSQNMRIIGKANNLLVSPAAQKLAMLDKHFAYLKDCGNYIEIGGAY SSGRIFSYFKSHNLAGAEFLQALPGSLGGLVKMNAGMKSYEIKQLLQAINVNGKWQDRESFPMNYRDSGIEGVILAARFH KREGFNNALQADFIALRKNHPKEPSCGSCFKNPKGDFAGRLLESVGLKGYCIGDAAFSEKHANFLINKGKATFEDALSLI TLAKKRVFEASGIDLECEVQILQ
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the murB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_HELHP (Q7VJ12)
Other databases:
- EMBL: AE017125 - RefSeq: NP_859970.1 - ProteinModelPortal: Q7VJ12 - SMR: Q7VJ12 - GeneID: 1493493 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0439 - NMPDR: fig|235279.1.peg.439 - HOGENOM: HBG686573 - OMA: LVKMNAG - ProtClustDB: PRK13904 - BioCyc: HHEP235279:HH_0439-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR003170 - InterPro: IPR011601 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 28841; Mature: 28841
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: ACT_SITE 146-146 ACT_SITE 188-188 ACT_SITE 258-258
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHIINFAKYSSIKIGAPLEVSLIQTPQDAISALSQNMRIIGKANNLLVSPAAQKLAML CCCEEEEHHHCCCEEECCCEEEEEECCCHHHHHHHHHCCEEEECCCCEEECHHHHHHHHH DKHFAYLKDCGNYIEIGGAYSSGRIFSYFKSHNLAGAEFLQALPGSLGGLVKMNAGMKSY HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCHH EIKQLLQAINVNGKWQDRESFPMNYRDSGIEGVILAARFHKREGFNNALQADFIALRKNH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCC PKEPSCGSCFKNPKGDFAGRLLESVGLKGYCIGDAAFSEKHANFLINKGKATFEDALSLI CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHCCEEEECCCCCHHHHHHHH TLAKKRVFEASGIDLECEVQILQ HHHHHHHHHCCCCCEEEEEEEEC >Mature Secondary Structure MQTHIINFAKYSSIKIGAPLEVSLIQTPQDAISALSQNMRIIGKANNLLVSPAAQKLAML CCCEEEEHHHCCCEEECCCEEEEEECCCHHHHHHHHHCCEEEECCCCEEECHHHHHHHHH DKHFAYLKDCGNYIEIGGAYSSGRIFSYFKSHNLAGAEFLQALPGSLGGLVKMNAGMKSY HHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCHH EIKQLLQAINVNGKWQDRESFPMNYRDSGIEGVILAARFHKREGFNNALQADFIALRKNH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHCCC PKEPSCGSCFKNPKGDFAGRLLESVGLKGYCIGDAAFSEKHANFLINKGKATFEDALSLI CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHCCEEEECCCCCHHHHHHHH TLAKKRVFEASGIDLECEVQILQ HHHHHHHHHCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954