| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is surE
Identifier: 32265834
GI number: 32265834
Start: 330594
End: 331388
Strand: Direct
Name: surE
Synonym: HH0335
Alternate gene names: 32265834
Gene position: 330594-331388 (Clockwise)
Preceding gene: 32265833
Following gene: 32265835
Centisome position: 18.38
GC content: 40.63
Gene sequence:
>795_bases ATGAAGCGCATTCTCCTTACCAATGATGATGGCTTTGACTCAAGCGGTCTTCTTGCACTCAAAGATGCCCTCAAAGATAT AGCACACGTGATGGTTGTCGCTCCAGCAAGTGAAAAATCAGCGTGTGGGCACGGACTAACACTCACGCGCCCACTTAGTT TTGTGCAGCTTGATGATGATTTTTATAAACTTGAAGATGGCACGCCCAGTGATTGTGTGTATCTTGCACTCAATACGCTT TATAAAGCATCGTGCAAACCCGATTTAGTTATTTCGGGCATTAATCTTGGCTCAAATATGGGAGAAGATATTACTTATTC AGGAACAGCTGCAGGCGCTATGGAAGGGTGCATACAAGGTGTGCCTTCTATTGCTATTTCACAGCTTATGCCAGATAAAA ATTGCTCAAAACATTTTGACTTTTCCCTTGCCAAAGAATGTATTTATAAAATCACTCAACTTATTTTTGCCAAAGGATTC CCTTTGGGAGAGCGCAAATTTCTTAATATCAATATCCCTCACATTAAGCCTAAAGAATGCAAAGGTTACAAAATCACGCA AATGGGTTATAGAATCTACGCTGATAATGCACATTTACACCGCAATCCACGAGGACAAGAATATTATTGGCTGGGGCTAC ACCCTTTAGAATGGGAAGAACGCAACGATATGCCTCATAGTTATGGTTCTGACTTTAAAGCAACGCACGAACATTATGTC TCTATCACACCTATCAAGCTTGATATGACAAGCTATGAGGATAGTTCATCTCTTTGCGAATGGATACAATTATGA
Upstream 100 bases:
>100_bases CTCGTATGAAAGAGCAGATTCAAAAAGAACTCCAAACATTTGATGAAGCCATTTATGTTCATTTGACTACTCTTTTGCAA GATTATTTCAAGGATATTGA
Downstream 100 bases:
>100_bases ATGAACTTGTTGATGAAAATACAATAATTGATAGATACACGCGTTCGCGCATTATTTTTGGCGAAAACTTTGAGCGCATA CAAAATACAAAAGTAGTTGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKRILLTNDDGFDSSGLLALKDALKDIAHVMVVAPASEKSACGHGLTLTRPLSFVQLDDDFYKLEDGTPSDCVYLALNTL YKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQGVPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFAKGF PLGERKFLNINIPHIKPKECKGYKITQMGYRIYADNAHLHRNPRGQEYYWLGLHPLEWEERNDMPHSYGSDFKATHEHYV SITPIKLDMTSYEDSSSLCEWIQL
Sequences:
>Translated_264_residues MKRILLTNDDGFDSSGLLALKDALKDIAHVMVVAPASEKSACGHGLTLTRPLSFVQLDDDFYKLEDGTPSDCVYLALNTL YKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQGVPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFAKGF PLGERKFLNINIPHIKPKECKGYKITQMGYRIYADNAHLHRNPRGQEYYWLGLHPLEWEERNDMPHSYGSDFKATHEHYV SITPIKLDMTSYEDSSSLCEWIQL >Mature_264_residues MKRILLTNDDGFDSSGLLALKDALKDIAHVMVVAPASEKSACGHGLTLTRPLSFVQLDDDFYKLEDGTPSDCVYLALNTL YKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQGVPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFAKGF PLGERKFLNINIPHIKPKECKGYKITQMGYRIYADNAHLHRNPRGQEYYWLGLHPLEWEERNDMPHSYGSDFKATHEHYV SITPIKLDMTSYEDSSSLCEWIQL
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=261, Percent_Identity=37.1647509578544, Blast_Score=174, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_HELHP (Q7VJA8)
Other databases:
- EMBL: AE017125 - RefSeq: NP_859866.1 - ProteinModelPortal: Q7VJA8 - SMR: Q7VJA8 - GeneID: 1493389 - GenomeReviews: AE017125_GR - KEGG: hhe:HH0335 - NMPDR: fig|235279.1.peg.335 - HOGENOM: HBG600532 - OMA: KHTASAG - ProtClustDB: PRK00346 - BioCyc: HHEP235279:HH_0335-MONOMER - BRENDA: 3.1.3.5 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 29538; Mature: 29538
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLTNDDGFDSSGLLALKDALKDIAHVMVVAPASEKSACGHGLTLTRPLSFVQLDDD CCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCEEEEEECCC FYKLEDGTPSDCVYLALNTLYKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQG EEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHC VPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFAKGFPLGERKFLNINIPHIKPKEC CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC KGYKITQMGYRIYADNAHLHRNPRGQEYYWLGLHPLEWEERNDMPHSYGSDFKATHEHYV CCEEEEECCEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE SITPIKLDMTSYEDSSSLCEWIQL EEEEEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure MKRILLTNDDGFDSSGLLALKDALKDIAHVMVVAPASEKSACGHGLTLTRPLSFVQLDDD CCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCEEEEEECCC FYKLEDGTPSDCVYLALNTLYKASCKPDLVISGINLGSNMGEDITYSGTAAGAMEGCIQG EEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHC VPSIAISQLMPDKNCSKHFDFSLAKECIYKITQLIFAKGFPLGERKFLNINIPHIKPKEC CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC KGYKITQMGYRIYADNAHLHRNPRGQEYYWLGLHPLEWEERNDMPHSYGSDFKATHEHYV CCEEEEECCEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEE SITPIKLDMTSYEDSSSLCEWIQL EEEEEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12810954