Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32265827

Identifier: 32265827

GI number: 32265827

Start: 326141

End: 326944

Strand: Direct

Name: 32265827

Synonym: HH0328

Alternate gene names: NA

Gene position: 326141-326944 (Clockwise)

Preceding gene: 32265826

Following gene: 32265828

Centisome position: 18.13

GC content: 38.31

Gene sequence:

>804_bases
ATGAATCTCTTTGCTCTTAGTCTTGAAGCTCTCCACGCTCCAAGCATAGAATCTAAACTTGCTCTCCTTGAAGTAGTTGC
ATCTCAAAAACATCTGCTCTGCGAGCAAATACTACATTCATCACATCATACACCATTTGCGTTGCAATCCCCCTCTTATG
CGAGATTCTGTGAGATTATCCACCCAACTAAAATTCGCCGCCCAAAGCACATTAAAAGTAAAGAATCTTTCGCCAAAGTG
CTACATTCTATTGTGCATATTGAATATAGTGCAATTGATTTAGCTCTTGATGCGCTCACGCGTTTTAAGAATCTGCCTCT
ATTATATTATGAAGATTGGCTTGAAGTGGCATTACAAGAAGGATTACACTTTCGCCTTTTGCGAGAATGTCTCAATAAAC
TTGGCTATGAGTATGGAGATTTTCCTGTGCATTCGCAGCTCTTTGATGCACAAGTAGCAACTCCTGATTTTAGCAATAGA
ATGGCATTACTTCATAGAGGACTAGAAGCAAATGGGCTTGATGCAAATCCTTTTGTAGCGAGCAAAATAAAAGAGTTTGA
GCATTCTATCACGCCTCAAGTGCTTGAAATTCTTGAAATCATTTTACACGATGAGATAGAACACGTTAAAAAAGGGGATA
AATGGTGGAAATTCGCAAATAATAAAGTAAGTGCGTGCGATTTTGTTGCAATCCTCAAACGTTTTGAGGCTTTTAAAGCA
ATTCCTAGAAATCTTCATTATGAGGCGAGACTAAAAGCAGGATTTTCACTTGAAGAGCTAGAAATAATCAAAGCAAATAG
CTAG

Upstream 100 bases:

>100_bases
AGCGAGACAATATGAGCTTTATTTCCACGGGTGGTGGAGCAAGTTTGGAGCTACTTGAAGGGAAAATTCTTCCTGCATTT
GAGGTGCTTGAGCGCAAATA

Downstream 100 bases:

>100_bases
TCTTATCCTAAATTTAAGTTTTAACACCCTATAATGCCTTTACGCAAAATTAAAGGGGTAAGAATGGAACTTTATATAAG
ATTAAAGCTTATTTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV
LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR
MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA
IPRNLHYEARLKAGFSLEELEIIKANS

Sequences:

>Translated_267_residues
MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV
LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR
MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA
IPRNLHYEARLKAGFSLEELEIIKANS
>Mature_267_residues
MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEIIHPTKIRRPKHIKSKESFAKV
LHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQEGLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNR
MALLHRGLEANGLDANPFVASKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA
IPRNLHYEARLKAGFSLEELEIIKANS

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 30628; Mature: 30628

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEII
CCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
HPTKIRRPKHIKSKESFAKVLHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQE
CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH
GLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNRMALLHRGLEANGLDANPFVA
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHH
SKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
IPRNLHYEARLKAGFSLEELEIIKANS
HHHCCCHHHHHHCCCCHHHHHEEECCC
>Mature Secondary Structure
MNLFALSLEALHAPSIESKLALLEVVASQKHLLCEQILHSSHHTPFALQSPSYARFCEII
CCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH
HPTKIRRPKHIKSKESFAKVLHSIVHIEYSAIDLALDALTRFKNLPLLYYEDWLEVALQE
CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHH
GLHFRLLRECLNKLGYEYGDFPVHSQLFDAQVATPDFSNRMALLHRGLEANGLDANPFVA
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHH
SKIKEFEHSITPQVLEILEIILHDEIEHVKKGDKWWKFANNKVSACDFVAILKRFEAFKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
IPRNLHYEARLKAGFSLEELEIIKANS
HHHCCCHHHHHHCCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]